Top 10 genes with highest correlation to Rv3328c/sigJ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1351/- | (cc=0.6387) | info on Rv1351/- |
| Rv2636/- | (cc=0.6109) | info on Rv2636/- |
| Rv2681/- | (cc=0.5947) | info on Rv2681/- |
| Rv3607c/folB | (cc=0.5921) | info on Rv3607c/folB |
| Rv0985c/mscL | (cc=0.5879) | info on Rv0985c/mscL |
| Rv0080/- | (cc=0.5856) | info on Rv0080/- |
| Rv0984/moaB2 | (cc=0.5852) | info on Rv0984/moaB2 |
| Rv0359/- | (cc=0.5687) | info on Rv0359/- |
| Rv1041c/- | (cc=0.562) | info on Rv1041c/- |
| Rv0356c/- | (cc=0.5619) | info on Rv0356c/- |
Correlation of Rv3328c/sigJ with Rv1351/-
Normalized LFCs for Rv3328c/sigJ:
(description and provenance of datasets)
| Rv3328c/sigJ | Rv1351/- | |
| Fe_supp_jason_reseq | 1.721 | 1.97 |
| low_pH_jason_reseq | -2.098 | -1.884 |
| NO_jason_reseq | -0.189 | 0.583 |
| B6_jason_reseq | 1.393 | 1.886 |
| MHCII_jason_reseq | 1.706 | 3.143 |
| Isoniazid02 | -0.495 | 0.052 |
| Rifampicin4 | 0.079 | -0.303 |
| Ethambutol3 | -0.528 | -0.185 |
| Meropenem3 | -0.343 | 0.043 |
| Vancomycin16 | -0.077 | 0.451 |
| Rv2680_day32 | -0.136 | 2.461 |
| H37Rv_KO_MarP | -0.106 | -0.969 |
| hypoxia_3wks | -0.614 | -0.57 |
| hypoxia_6wks | -1.662 | -1.52 |
| glycerol | 0.468 | -0.099 |
| cholesterol | 0.0 | -0.227 |
| AJ | -0.049 | -0.286 |
| Bibs02 | 0.0 | 0.715 |
| Bibs02c | 0.644 | 1.325 |
| BL6 | -0.12 | -0.062 |
| BL6a | -0.056 | 0.814 |
| BXD01 | -0.796 | 0.893 |
| BXD010 | -1.174 | 0.217 |
| BXD011 | -1.025 | -0.805 |
| BXD03 | -1.109 | -1.439 |
| BXD04 | -0.905 | -0.309 |
| BXD05 | -1.535 | -0.715 |
| BXD06 | -1.61 | -0.135 |
| BXD07 | -1.365 | -0.587 |
| BXD08 | -0.991 | 0.564 |
| BXD09 | -1.896 | -0.769 |
| CAST | 0.442 | 0.274 |
| CCcont | -1.319 | 0.0 |
| DS01 | 0.652 | 0.176 |
| DS02 | 0.646 | 0.807 |
| DS04 | 0.715 | -0.115 |
| DS0c | 1.032 | 0.76 |
| GP01 | -0.028 | -1.908 |
| GP02 | -0.119 | -1.986 |
| GP0c | -1.027 | -0.993 |
| NOD | 0.296 | 1.375 |
| NZO | -0.75 | -0.996 |
| PWK | 0.742 | -0.54 |
| H37Rv_KO_CtpC | -0.411 | -0.712 |
| H37Rv_KO_CtpD | 0.557 | -1.188 |
| H37Rv_KO_Rv1272 | -0.179 | 0.227 |
| H37Rv_KO_SugABC | -2.188 | -1.326 |
| H37Rv_KO_MbtN | -1.155 | -0.31 |
| Trans05 | -0.125 | -0.849 |
| macrophage_unactivated | -0.672 | -0.237 |
| IL1 | -2.186 | -3.85 |
| Rapamycin | -1.501 | -2.44 |
| Tcell | -0.978 | -0.244 |
| GMCSF | -0.911 | -2.978 |
| IFNab | -1.403 | -2.403 |
| IFNg | -2.576 | -2.48 |
| IFNg_GMCSF1 | -1.304 | -0.751 |
| Rv1432_day32 | 0.222 | -0.623 |
| Rv1565c_day32 | 0.205 | 0.242 |
| secA2_input | 1.19 | 0.1 |
| delta_Rv3594 | -0.298 | 0.196 |
| delta_Rv3717 | -0.944 | -0.331 |
| delta_Rv3811 | -0.335 | 0.526 |
| delta_Rv0954 | -0.068 | 0.756 |
| PonA1 | -0.387 | 0.335 |
| EccD1_KO | 0.97 | 0.355 |
| EspI_KO | -0.046 | -0.163 |
| PE35_KO | -0.245 | -0.341 |
| PPE68_KO | -0.106 | -0.643 |
| glycerol2 | -0.247 | -0.68 |
| lignocerate | -0.458 | -0.257 |
| oleate | -0.065 | 0.147 |
| phosphatidylcholine | -0.27 | 0.158 |
| acetate | -0.899 | -0.066 |
| glucAc | -0.13 | -0.446 |
| Rv0950ko | -1.167 | -1.11 |
| Rv1096ko | -0.691 | 0.078 |
| Rv3684ko | -0.698 | 0.485 |
| delta_otsA_trehalose | -0.214 | 0.378 |