Top 10 genes with highest correlation to Rv3321c/vapB44:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0268c/- | (cc=0.4792) | info on Rv0268c/- |
| Rv2351c/plcA | (cc=0.4533) | info on Rv2351c/plcA |
| Rv3064c/- | (cc=0.4512) | info on Rv3064c/- |
| Rv3420c/rimI | (cc=0.4423) | info on Rv3420c/rimI |
| Rv0507/mmpL2 | (cc=0.4379) | info on Rv0507/mmpL2 |
| Rv0387c/- | (cc=0.4251) | info on Rv0387c/- |
| Rv1863c/- | (cc=0.4237) | info on Rv1863c/- |
| Rv2641/cadI | (cc=0.4145) | info on Rv2641/cadI |
| Rv2771c/- | (cc=0.4103) | info on Rv2771c/- |
| Rv3763/lpqH | (cc=0.4096) | info on Rv3763/lpqH |
Correlation of Rv3321c/vapB44 with Rv3420c/rimI
Normalized LFCs for Rv3321c/vapB44:
(description and provenance of datasets)
| Rv3321c/vapB44 | Rv3420c/rimI | |
| Fe_supp_jason_reseq | 1.88 | 0.087 |
| low_pH_jason_reseq | -0.82 | -1.201 |
| NO_jason_reseq | 0.097 | 0.354 |
| B6_jason_reseq | 0.505 | 1.094 |
| MHCII_jason_reseq | 1.109 | -0.177 |
| Isoniazid02 | 0.329 | -0.019 |
| Rifampicin4 | 0.81 | 0.717 |
| Ethambutol3 | 2.563 | 2.462 |
| Meropenem3 | 0.532 | 0.074 |
| Vancomycin16 | 0.395 | 1.438 |
| Rv2680_day32 | 0.2 | -0.082 |
| H37Rv_KO_MarP | 0.471 | 1.266 |
| hypoxia_3wks | 0.072 | -1.934 |
| hypoxia_6wks | -0.737 | -1.478 |
| glycerol | -1.182 | -0.503 |
| cholesterol | 0.486 | -0.39 |
| AJ | -1.294 | -1.755 |
| Bibs02 | 0.567 | -1.325 |
| Bibs02c | 0.391 | -1.387 |
| BL6 | -0.197 | -1.627 |
| BL6a | 0.709 | -0.794 |
| BXD01 | -0.154 | -0.406 |
| BXD010 | 0.135 | 0.556 |
| BXD011 | 0.056 | -1.05 |
| BXD03 | 0.527 | 0.0 |
| BXD04 | 0.172 | -1.108 |
| BXD05 | 0.977 | -0.181 |
| BXD06 | -0.177 | 0.432 |
| BXD07 | -0.18 | -0.523 |
| BXD08 | 0.535 | -0.963 |
| BXD09 | 0.098 | -1.018 |
| CAST | 0.34 | -1.979 |
| CCcont | -0.052 | -0.372 |
| DS01 | -0.335 | -2.496 |
| DS02 | -0.673 | -0.586 |
| DS04 | -0.037 | -1.467 |
| DS0c | -0.071 | -1.944 |
| GP01 | -0.026 | -1.462 |
| GP02 | -1.594 | -1.558 |
| GP0c | -0.334 | -0.582 |
| NOD | 0.568 | -1.006 |
| NZO | -0.819 | -1.15 |
| PWK | -0.006 | -0.095 |
| H37Rv_KO_CtpC | -0.079 | -0.438 |
| H37Rv_KO_CtpD | 2.057 | 0.187 |
| H37Rv_KO_Rv1272 | -0.441 | -1.163 |
| H37Rv_KO_SugABC | -0.09 | 0.388 |
| H37Rv_KO_MbtN | 0.396 | 0.285 |
| Trans05 | 0.132 | -0.988 |
| macrophage_unactivated | -0.925 | -0.537 |
| IL1 | -1.246 | -1.391 |
| Rapamycin | -0.049 | -1.795 |
| Tcell | -0.495 | -0.267 |
| GMCSF | 0.607 | 0.0 |
| IFNab | 0.704 | -0.514 |
| IFNg | 0.008 | -0.577 |
| IFNg_GMCSF1 | 0.339 | -2.665 |
| Rv1432_day32 | -0.302 | -0.218 |
| Rv1565c_day32 | 1.068 | 0.619 |
| secA2_input | -0.778 | 0.045 |
| delta_Rv3594 | 0.3 | 0.057 |
| delta_Rv3717 | 0.721 | 1.482 |
| delta_Rv3811 | 0.236 | 0.074 |
| delta_Rv0954 | -0.349 | -0.831 |
| PonA1 | 0.31 | -0.788 |
| EccD1_KO | -0.724 | -0.447 |
| EspI_KO | -0.237 | -0.094 |
| PE35_KO | -1.167 | -0.449 |
| PPE68_KO | -1.718 | -0.55 |
| glycerol2 | 0.839 | -0.967 |
| lignocerate | 0.539 | -0.205 |
| oleate | 1.16 | 0.139 |
| phosphatidylcholine | 0.873 | -0.041 |
| acetate | -0.352 | 0.457 |
| glucAc | 0.965 | -0.532 |
| Rv0950ko | 0.811 | 1.318 |
| Rv1096ko | 0.615 | 0.956 |
| Rv3684ko | -0.013 | 0.485 |
| delta_otsA_trehalose | 3.088 | 0.393 |