Top 10 genes with highest correlation to Rv3321c/vapB44:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0268c/- | (cc=0.4792) | info on Rv0268c/- |
| Rv2351c/plcA | (cc=0.4533) | info on Rv2351c/plcA |
| Rv3064c/- | (cc=0.4512) | info on Rv3064c/- |
| Rv3420c/rimI | (cc=0.4423) | info on Rv3420c/rimI |
| Rv0507/mmpL2 | (cc=0.4379) | info on Rv0507/mmpL2 |
| Rv0387c/- | (cc=0.4251) | info on Rv0387c/- |
| Rv1863c/- | (cc=0.4237) | info on Rv1863c/- |
| Rv2641/cadI | (cc=0.4145) | info on Rv2641/cadI |
| Rv2771c/- | (cc=0.4103) | info on Rv2771c/- |
| Rv3763/lpqH | (cc=0.4096) | info on Rv3763/lpqH |
Correlation of Rv3321c/vapB44 with Rv1863c/-
Normalized LFCs for Rv3321c/vapB44:
(description and provenance of datasets)
| Rv3321c/vapB44 | Rv1863c/- | |
| Fe_supp_jason_reseq | 1.88 | -0.259 |
| low_pH_jason_reseq | -0.82 | -1.472 |
| NO_jason_reseq | 0.097 | -0.417 |
| B6_jason_reseq | 0.505 | -0.322 |
| MHCII_jason_reseq | 1.109 | 0.182 |
| Isoniazid02 | 0.329 | 0.339 |
| Rifampicin4 | 0.81 | 0.149 |
| Ethambutol3 | 2.563 | 1.726 |
| Meropenem3 | 0.532 | 1.155 |
| Vancomycin16 | 0.395 | -0.096 |
| Rv2680_day32 | 0.2 | -0.431 |
| H37Rv_KO_MarP | 0.471 | -0.025 |
| hypoxia_3wks | 0.072 | -0.048 |
| hypoxia_6wks | -0.737 | -0.079 |
| glycerol | -1.182 | 0.044 |
| cholesterol | 0.486 | -0.04 |
| AJ | -1.294 | 0.018 |
| Bibs02 | 0.567 | -0.509 |
| Bibs02c | 0.391 | 0.427 |
| BL6 | -0.197 | -0.668 |
| BL6a | 0.709 | -0.027 |
| BXD01 | -0.154 | -0.161 |
| BXD010 | 0.135 | 0.194 |
| BXD011 | 0.056 | -0.492 |
| BXD03 | 0.527 | -1.123 |
| BXD04 | 0.172 | -0.203 |
| BXD05 | 0.977 | -0.964 |
| BXD06 | -0.177 | -0.48 |
| BXD07 | -0.18 | -0.415 |
| BXD08 | 0.535 | -0.315 |
| BXD09 | 0.098 | -0.7 |
| CAST | 0.34 | 0.322 |
| CCcont | -0.052 | -0.426 |
| DS01 | -0.335 | 0.255 |
| DS02 | -0.673 | 0.035 |
| DS04 | -0.037 | -0.472 |
| DS0c | -0.071 | -0.588 |
| GP01 | -0.026 | -0.107 |
| GP02 | -1.594 | -0.758 |
| GP0c | -0.334 | -0.189 |
| NOD | 0.568 | 0.078 |
| NZO | -0.819 | 0.273 |
| PWK | -0.006 | -0.23 |
| H37Rv_KO_CtpC | -0.079 | 0.402 |
| H37Rv_KO_CtpD | 2.057 | 0.189 |
| H37Rv_KO_Rv1272 | -0.441 | 0.738 |
| H37Rv_KO_SugABC | -0.09 | 0.042 |
| H37Rv_KO_MbtN | 0.396 | -0.186 |
| Trans05 | 0.132 | 0.474 |
| macrophage_unactivated | -0.925 | -0.306 |
| IL1 | -1.246 | -0.362 |
| Rapamycin | -0.049 | -0.074 |
| Tcell | -0.495 | -0.74 |
| GMCSF | 0.607 | -0.808 |
| IFNab | 0.704 | -0.493 |
| IFNg | 0.008 | -0.422 |
| IFNg_GMCSF1 | 0.339 | -0.163 |
| Rv1432_day32 | -0.302 | 0.1 |
| Rv1565c_day32 | 1.068 | -0.804 |
| secA2_input | -0.778 | -1.23 |
| delta_Rv3594 | 0.3 | 0.17 |
| delta_Rv3717 | 0.721 | 0.303 |
| delta_Rv3811 | 0.236 | 0.147 |
| delta_Rv0954 | -0.349 | 0.375 |
| PonA1 | 0.31 | -1.064 |
| EccD1_KO | -0.724 | -0.168 |
| EspI_KO | -0.237 | 0.197 |
| PE35_KO | -1.167 | -0.289 |
| PPE68_KO | -1.718 | -0.301 |
| glycerol2 | 0.839 | 0.261 |
| lignocerate | 0.539 | 0.8 |
| oleate | 1.16 | 0.79 |
| phosphatidylcholine | 0.873 | 0.896 |
| acetate | -0.352 | 0.013 |
| glucAc | 0.965 | -0.469 |
| Rv0950ko | 0.811 | 0.808 |
| Rv1096ko | 0.615 | 0.796 |
| Rv3684ko | -0.013 | 0.167 |
| delta_otsA_trehalose | 3.088 | 1.84 |