Top 10 genes with highest correlation to Rv3305c/amiA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1664/pks9 | (cc=0.5626) | info on Rv1664/pks9 |
| Rv2190c/- | (cc=0.5293) | info on Rv2190c/- |
| Rv2179c/- | (cc=0.5248) | info on Rv2179c/- |
| Rv2584c/apt | (cc=0.5186) | info on Rv2584c/apt |
| Rv2519/PE26 | (cc=0.5142) | info on Rv2519/PE26 |
| Rv2352c/PPE38 | (cc=0.5087) | info on Rv2352c/PPE38 |
| Rv3864/espE | (cc=0.5063) | info on Rv3864/espE |
| Rv1420/uvrC | (cc=0.4914) | info on Rv1420/uvrC |
| Rv2886c/- | (cc=0.4886) | info on Rv2886c/- |
| Rv3750c/- | (cc=0.4825) | info on Rv3750c/- |
Correlation of Rv3305c/amiA1 with Rv3750c/-
Normalized LFCs for Rv3305c/amiA1:
(description and provenance of datasets)
| Rv3305c/amiA1 | Rv3750c/- | |
| Fe_supp_jason_reseq | -1.711 | -0.723 |
| low_pH_jason_reseq | -2.014 | -0.052 |
| NO_jason_reseq | -0.454 | -0.163 |
| B6_jason_reseq | -1.483 | -1.315 |
| MHCII_jason_reseq | 0.372 | -1.782 |
| Isoniazid02 | -1.007 | 0.039 |
| Rifampicin4 | 0.062 | -0.758 |
| Ethambutol3 | -0.337 | 0.134 |
| Meropenem3 | -1.118 | -0.492 |
| Vancomycin16 | -1.374 | 0.058 |
| Rv2680_day32 | 0.595 | 0.426 |
| H37Rv_KO_MarP | -0.449 | 0.498 |
| hypoxia_3wks | -1.252 | -1.447 |
| hypoxia_6wks | 0.814 | -0.679 |
| glycerol | 2.099 | 1.233 |
| cholesterol | 1.663 | -0.765 |
| AJ | 0.255 | -0.536 |
| Bibs02 | 1.099 | 0.764 |
| Bibs02c | -0.55 | 1.075 |
| BL6 | 0.882 | 0.798 |
| BL6a | 0.0 | 1.499 |
| BXD01 | 1.316 | 1.087 |
| BXD010 | -0.337 | 1.049 |
| BXD011 | 0.226 | 0.801 |
| BXD03 | 0.657 | 0.729 |
| BXD04 | 1.303 | 0.932 |
| BXD05 | 0.78 | 1.4 |
| BXD06 | 0.941 | 1.206 |
| BXD07 | 0.456 | 1.543 |
| BXD08 | 1.626 | 1.697 |
| BXD09 | 0.614 | 0.75 |
| CAST | 0.172 | 1.148 |
| CCcont | 2.22 | 1.338 |
| DS01 | 0.778 | 0.811 |
| DS02 | -0.922 | 1.257 |
| DS04 | 1.036 | 0.032 |
| DS0c | 0.313 | 1.92 |
| GP01 | 0.527 | 1.878 |
| GP02 | -0.705 | -0.042 |
| GP0c | 0.231 | 0.865 |
| NOD | 0.324 | 0.361 |
| NZO | -0.733 | 0.685 |
| PWK | -0.242 | -0.453 |
| H37Rv_KO_CtpC | 0.79 | 1.655 |
| H37Rv_KO_CtpD | 1.37 | 0.933 |
| H37Rv_KO_Rv1272 | 1.885 | 1.322 |
| H37Rv_KO_SugABC | 0.956 | 0.409 |
| H37Rv_KO_MbtN | 0.747 | 1.622 |
| Trans05 | 1.413 | 1.553 |
| macrophage_unactivated | 1.613 | 0.413 |
| IL1 | 0.107 | -0.682 |
| Rapamycin | 0.988 | 0.095 |
| Tcell | 1.323 | -0.062 |
| GMCSF | 1.669 | 0.224 |
| IFNab | -0.112 | -0.435 |
| IFNg | -0.299 | 0.545 |
| IFNg_GMCSF1 | 0.0 | 0.936 |
| Rv1432_day32 | 0.117 | -0.563 |
| Rv1565c_day32 | 1.039 | 1.265 |
| secA2_input | -1.781 | -0.537 |
| delta_Rv3594 | 1.173 | 0.324 |
| delta_Rv3717 | 0.593 | -0.372 |
| delta_Rv3811 | 0.561 | -0.122 |
| delta_Rv0954 | -0.067 | -0.496 |
| PonA1 | 0.085 | -0.763 |
| EccD1_KO | -0.477 | -0.023 |
| EspI_KO | -0.174 | 0.294 |
| PE35_KO | -0.554 | -1.041 |
| PPE68_KO | -1.84 | -1.126 |
| glycerol2 | 0.252 | -0.261 |
| lignocerate | -0.387 | 0.226 |
| oleate | -1.229 | 0.009 |
| phosphatidylcholine | -1.535 | 0.017 |
| acetate | -1.006 | 0.219 |
| glucAc | -1.159 | 0.466 |
| Rv0950ko | -1.155 | -0.383 |
| Rv1096ko | -0.148 | -1.149 |
| Rv3684ko | -1.153 | -0.874 |
| delta_otsA_trehalose | 1.247 | 2.322 |