Top 10 genes with highest correlation to Rv3258c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3789/- | (cc=0.7401) | info on Rv3789/- |
Rv3671c/- | (cc=0.6645) | info on Rv3671c/- |
Rv2553c/- | (cc=0.6559) | info on Rv2553c/- |
Rv3101c/ftsX | (cc=0.6426) | info on Rv3101c/ftsX |
Rv1080c/greA | (cc=0.626) | info on Rv1080c/greA |
Rv3670/ephE | (cc=0.6211) | info on Rv3670/ephE |
Rv1836c/- | (cc=0.6134) | info on Rv1836c/- |
Rv0955/- | (cc=0.6074) | info on Rv0955/- |
Rv3102c/ftsE | (cc=0.6071) | info on Rv3102c/ftsE |
Rv0541c/- | (cc=0.5632) | info on Rv0541c/- |
Correlation of Rv3258c/- with Rv3101c/ftsX
Normalized LFCs for Rv3258c/-:
(description and provenance of datasets)
Rv3258c/- | Rv3101c/ftsX | |
Fe_supp_jason_reseq | 0.974 | 1.811 |
low_pH_jason_reseq | -0.979 | -0.811 |
NO_jason_reseq | -1.536 | -1.273 |
B6_jason_reseq | -0.649 | -0.538 |
MHCII_jason_reseq | -0.572 | -0.217 |
Isoniazid02 | 0.0 | -0.383 |
Rifampicin4 | 0.0 | -0.712 |
Ethambutol3 | 0.0 | -0.32 |
Meropenem3 | 0.0 | -0.315 |
Vancomycin16 | 0.0 | -0.698 |
Rv2680_day32 | 0.0 | 0.0 |
H37Rv_KO_MarP | -3.852 | -5.633 |
hypoxia_3wks | 0.0 | 0.0 |
hypoxia_6wks | 0.0 | 0.0 |
glycerol | 0.0 | 0.0 |
cholesterol | 0.0 | 0.0 |
AJ | 0.232 | 0.0 |
Bibs02 | 0.0 | 0.0 |
Bibs02c | 0.0 | 0.0 |
BL6 | 0.0 | 0.0 |
BL6a | 0.0 | 0.377 |
BXD01 | 0.0 | 0.0 |
BXD010 | 0.0 | 0.0 |
BXD011 | 0.0 | 0.243 |
BXD03 | 0.0 | 0.0 |
BXD04 | 0.0 | 0.0 |
BXD05 | 0.369 | 0.135 |
BXD06 | 0.0 | 0.0 |
BXD07 | 0.0 | 0.0 |
BXD08 | 0.0 | 0.0 |
BXD09 | 0.0 | 0.0 |
CAST | 0.0 | 0.0 |
CCcont | 0.525 | 1.231 |
DS01 | 0.0 | 0.0 |
DS02 | 0.0 | 0.0 |
DS04 | 2.159 | 0.194 |
DS0c | 0.0 | 0.0 |
GP01 | 0.0 | 0.099 |
GP02 | 0.0 | 0.0 |
GP0c | 0.0 | 0.0 |
NOD | 0.0 | 0.0 |
NZO | 0.548 | 0.0 |
PWK | 0.0 | 0.0 |
H37Rv_KO_CtpC | 0.0 | 0.901 |
H37Rv_KO_CtpD | 0.348 | 0.348 |
H37Rv_KO_Rv1272 | 0.0 | 0.0 |
H37Rv_KO_SugABC | 1.267 | 0.608 |
H37Rv_KO_MbtN | 0.85 | 1.349 |
Trans05 | 0.0 | 0.131 |
macrophage_unactivated | 0.0 | -0.571 |
IL1 | 0.0 | -1.148 |
Rapamycin | 0.0 | -1.188 |
Tcell | 0.0 | -0.912 |
GMCSF | 0.0 | -0.739 |
IFNab | 0.0 | 1.318 |
IFNg | 0.0 | -1.034 |
IFNg_GMCSF1 | 0.0 | -0.88 |
Rv1432_day32 | 0.0 | 0.0 |
Rv1565c_day32 | 0.0 | 0.0 |
secA2_input | 1.415 | 0.584 |
delta_Rv3594 | 2.041 | 1.274 |
delta_Rv3717 | 0.793 | 1.141 |
delta_Rv3811 | 1.737 | 1.161 |
delta_Rv0954 | -2.153 | -1.541 |
PonA1 | -0.63 | -1.262 |
EccD1_KO | -0.97 | 0.908 |
EspI_KO | -1.338 | 0.605 |
PE35_KO | -2.202 | -0.595 |
PPE68_KO | -3.033 | 1.536 |
glycerol2 | 0.0 | 0.0 |
lignocerate | 0.0 | 0.0 |
oleate | 0.0 | 0.0 |
phosphatidylcholine | 0.0 | 0.0 |
acetate | 0.0 | 0.0 |
glucAc | 0.0 | 0.0 |
Rv0950ko | -2.735 | -6.0 |
Rv1096ko | 1.143 | 1.96 |
Rv3684ko | 0.992 | 2.715 |
delta_otsA_trehalose | 0.0 | -0.204 |