Top 10 genes with highest correlation to Rv3250c/rubB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1673c/- | (cc=0.3767) | info on Rv1673c/- |
| Rv0889c/citA | (cc=0.3766) | info on Rv0889c/citA |
| Rv1172c/PE12 | (cc=0.3659) | info on Rv1172c/PE12 |
| Rv1765c/- | (cc=0.3616) | info on Rv1765c/- |
| Rv2323c/- | (cc=0.3483) | info on Rv2323c/- |
| Rv0316/- | (cc=0.3478) | info on Rv0316/- |
| Rv3358/relK | (cc=0.343) | info on Rv3358/relK |
| Rv1737c/narK2 | (cc=0.3407) | info on Rv1737c/narK2 |
| Rv2506/- | (cc=0.3382) | info on Rv2506/- |
| Rv2063A/mazF7 | (cc=0.327) | info on Rv2063A/mazF7 |
Correlation of Rv3250c/rubB with Rv1673c/-
Normalized LFCs for Rv3250c/rubB:
(description and provenance of datasets)
| Rv3250c/rubB | Rv1673c/- | |
| Fe_supp_jason_reseq | 1.702 | -0.065 |
| low_pH_jason_reseq | -0.724 | -0.494 |
| NO_jason_reseq | 1.218 | -0.255 |
| B6_jason_reseq | -1.59 | -1.081 |
| MHCII_jason_reseq | -0.694 | -0.123 |
| Isoniazid02 | 0.485 | 0.041 |
| Rifampicin4 | -0.742 | 0.038 |
| Ethambutol3 | 0.32 | -0.4 |
| Meropenem3 | -0.777 | 0.307 |
| Vancomycin16 | 0.122 | 0.0 |
| Rv2680_day32 | 1.252 | 1.117 |
| H37Rv_KO_MarP | 0.374 | 0.237 |
| hypoxia_3wks | -0.227 | 0.622 |
| hypoxia_6wks | -0.654 | 0.791 |
| glycerol | 0.029 | 0.063 |
| cholesterol | -1.049 | 0.067 |
| AJ | 1.092 | 1.324 |
| Bibs02 | 0.775 | 0.592 |
| Bibs02c | 0.147 | 0.159 |
| BL6 | -0.206 | -0.654 |
| BL6a | -0.502 | 0.524 |
| BXD01 | 0.326 | -0.085 |
| BXD010 | -1.363 | 0.529 |
| BXD011 | -1.609 | 0.806 |
| BXD03 | -0.712 | 0.422 |
| BXD04 | -0.76 | -0.68 |
| BXD05 | 0.93 | 0.817 |
| BXD06 | -0.467 | 0.417 |
| BXD07 | -0.906 | -0.138 |
| BXD08 | 0.576 | 0.564 |
| BXD09 | -1.238 | 0.044 |
| CAST | 0.098 | 0.851 |
| CCcont | -0.044 | -0.072 |
| DS01 | -0.756 | -0.541 |
| DS02 | -1.018 | -0.293 |
| DS04 | -0.115 | 0.259 |
| DS0c | -0.57 | -0.141 |
| GP01 | 0.483 | 1.252 |
| GP02 | 0.392 | -0.657 |
| GP0c | -0.379 | 0.823 |
| NOD | 1.814 | 0.421 |
| NZO | -0.525 | 1.413 |
| PWK | -0.81 | 0.494 |
| H37Rv_KO_CtpC | 0.398 | 1.405 |
| H37Rv_KO_CtpD | 1.457 | 1.885 |
| H37Rv_KO_Rv1272 | -2.703 | 0.301 |
| H37Rv_KO_SugABC | -1.733 | -0.749 |
| H37Rv_KO_MbtN | -0.242 | 0.884 |
| Trans05 | -0.457 | 0.453 |
| macrophage_unactivated | -1.597 | -0.84 |
| IL1 | -1.145 | -2.186 |
| Rapamycin | -2.197 | -1.547 |
| Tcell | -0.209 | -1.303 |
| GMCSF | 0.161 | -0.607 |
| IFNab | -0.789 | -1.932 |
| IFNg | -1.304 | -1.585 |
| IFNg_GMCSF1 | -0.16 | -1.515 |
| Rv1432_day32 | 0.164 | -0.416 |
| Rv1565c_day32 | -0.033 | 1.185 |
| secA2_input | 0.102 | -0.573 |
| delta_Rv3594 | -0.012 | -0.439 |
| delta_Rv3717 | 0.293 | -0.123 |
| delta_Rv3811 | -1.001 | -0.827 |
| delta_Rv0954 | 0.423 | -0.833 |
| PonA1 | -0.067 | 0.41 |
| EccD1_KO | -1.431 | 0.914 |
| EspI_KO | 0.02 | 0.841 |
| PE35_KO | 0.149 | 2.071 |
| PPE68_KO | 0.797 | 2.643 |
| glycerol2 | -0.053 | -0.853 |
| lignocerate | -0.136 | -0.51 |
| oleate | -1.328 | -0.142 |
| phosphatidylcholine | -0.826 | -0.332 |
| acetate | -0.336 | -0.166 |
| glucAc | -0.051 | -0.649 |
| Rv0950ko | -0.271 | 0.0 |
| Rv1096ko | -0.066 | 0.356 |
| Rv3684ko | -1.67 | -0.822 |
| delta_otsA_trehalose | -0.101 | -0.892 |