Top 10 genes with highest correlation to Rv3241c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0712/- | (cc=0.4472) | info on Rv0712/- |
| Rv0242c/fabG4 | (cc=0.4154) | info on Rv0242c/fabG4 |
| Rv0241c/htdX | (cc=0.4078) | info on Rv0241c/htdX |
| Rv3160c/- | (cc=0.3979) | info on Rv3160c/- |
| Rv3704c/gshA | (cc=0.3631) | info on Rv3704c/gshA |
| Rv2407/- | (cc=0.3609) | info on Rv2407/- |
| Rv0391/metZ | (cc=0.3566) | info on Rv0391/metZ |
| Rv3213c/- | (cc=0.3551) | info on Rv3213c/- |
| Rv1537/dinX | (cc=0.3547) | info on Rv1537/dinX |
| Rv1596/nadC | (cc=0.3522) | info on Rv1596/nadC |
Correlation of Rv3241c/- with Rv0242c/fabG4
Normalized LFCs for Rv3241c/-:
(description and provenance of datasets)
| Rv3241c/- | Rv0242c/fabG4 | |
| Fe_supp_jason_reseq | -0.205 | 2.04 |
| low_pH_jason_reseq | -1.429 | -1.591 |
| NO_jason_reseq | -0.966 | -2.759 |
| B6_jason_reseq | -0.505 | -1.413 |
| MHCII_jason_reseq | 0.012 | -0.05 |
| Isoniazid02 | -0.614 | -0.178 |
| Rifampicin4 | 0.542 | 0.588 |
| Ethambutol3 | 0.009 | -0.993 |
| Meropenem3 | 0.15 | -1.152 |
| Vancomycin16 | -0.382 | -0.804 |
| Rv2680_day32 | 0.469 | -1.217 |
| H37Rv_KO_MarP | 0.137 | -1.713 |
| hypoxia_3wks | -0.343 | 0.187 |
| hypoxia_6wks | -1.117 | -1.222 |
| glycerol | -1.084 | -2.583 |
| cholesterol | -0.835 | -1.049 |
| AJ | 0.39 | -1.168 |
| Bibs02 | 0.083 | -0.747 |
| Bibs02c | -1.043 | -2.102 |
| BL6 | 0.122 | -0.761 |
| BL6a | -0.776 | -1.317 |
| BXD01 | -0.154 | -1.418 |
| BXD010 | -0.286 | -0.779 |
| BXD011 | -0.284 | -0.641 |
| BXD03 | -0.31 | -0.435 |
| BXD04 | -1.042 | -1.147 |
| BXD05 | -0.277 | -1.352 |
| BXD06 | -0.344 | -1.341 |
| BXD07 | -0.301 | -1.09 |
| BXD08 | -0.486 | -1.138 |
| BXD09 | -0.569 | -0.855 |
| CAST | -0.345 | -1.532 |
| CCcont | 0.286 | 0.938 |
| DS01 | -1.006 | -0.149 |
| DS02 | -1.438 | -1.323 |
| DS04 | -0.982 | -1.077 |
| DS0c | 0.222 | -1.204 |
| GP01 | 0.908 | -0.715 |
| GP02 | -0.427 | -0.981 |
| GP0c | 0.599 | -0.721 |
| NOD | 1.054 | -1.131 |
| NZO | -0.225 | -1.326 |
| PWK | 0.909 | -1.194 |
| H37Rv_KO_CtpC | 0.088 | -0.269 |
| H37Rv_KO_CtpD | -0.941 | -0.257 |
| H37Rv_KO_Rv1272 | -0.159 | -0.938 |
| H37Rv_KO_SugABC | -0.329 | -0.995 |
| H37Rv_KO_MbtN | 0.625 | -0.572 |
| Trans05 | -0.876 | -1.212 |
| macrophage_unactivated | 0.931 | 0.761 |
| IL1 | 0.113 | -0.86 |
| Rapamycin | 0.187 | -0.727 |
| Tcell | 0.437 | 0.411 |
| GMCSF | -1.088 | -1.376 |
| IFNab | 0.931 | 1.636 |
| IFNg | 0.414 | -0.919 |
| IFNg_GMCSF1 | -0.305 | -1.637 |
| Rv1432_day32 | -0.705 | -1.845 |
| Rv1565c_day32 | -0.667 | 0.305 |
| secA2_input | -0.205 | 1.019 |
| delta_Rv3594 | -0.113 | -1.663 |
| delta_Rv3717 | -0.315 | -1.792 |
| delta_Rv3811 | -0.608 | -1.616 |
| delta_Rv0954 | 0.328 | 0.996 |
| PonA1 | -0.764 | 0.185 |
| EccD1_KO | 0.802 | 0.852 |
| EspI_KO | 0.222 | -0.114 |
| PE35_KO | -0.426 | -0.385 |
| PPE68_KO | -0.227 | -0.154 |
| glycerol2 | 0.149 | -0.542 |
| lignocerate | -0.701 | -0.471 |
| oleate | -0.641 | -0.89 |
| phosphatidylcholine | -1.475 | -0.253 |
| acetate | 0.095 | 0.618 |
| glucAc | 0.317 | 0.385 |
| Rv0950ko | 0.211 | 0.675 |
| Rv1096ko | 0.6 | 0.29 |
| Rv3684ko | 1.287 | 0.282 |
| delta_otsA_trehalose | 2.036 | -0.201 |