Top 10 genes with highest correlation to Rv3237c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0902c/prrB | (cc=0.4851) | info on Rv0902c/prrB |
| Rv2218/lipA | (cc=0.4313) | info on Rv2218/lipA |
| Rv2970c/lipN | (cc=0.4087) | info on Rv2970c/lipN |
| Rv2200c/ctaC | (cc=0.3898) | info on Rv2200c/ctaC |
| Rv0446c/- | (cc=0.3869) | info on Rv0446c/- |
| Rv0192/- | (cc=0.3808) | info on Rv0192/- |
| Rv2263/- | (cc=0.3775) | info on Rv2263/- |
| Rv0255c/cobQ1 | (cc=0.3732) | info on Rv0255c/cobQ1 |
| Rv0697/- | (cc=0.3625) | info on Rv0697/- |
| Rv0351/grpE | (cc=0.3535) | info on Rv0351/grpE |
Correlation of Rv3237c/- with Rv2263/-
Normalized LFCs for Rv3237c/-:
(description and provenance of datasets)
| Rv3237c/- | Rv2263/- | |
| Fe_supp_jason_reseq | -0.48 | 0.088 |
| low_pH_jason_reseq | -0.139 | -0.437 |
| NO_jason_reseq | -1.643 | -0.045 |
| B6_jason_reseq | -0.18 | -0.23 |
| MHCII_jason_reseq | 0.837 | 0.122 |
| Isoniazid02 | -0.626 | 0.016 |
| Rifampicin4 | -0.19 | 0.525 |
| Ethambutol3 | -0.259 | -0.086 |
| Meropenem3 | -0.704 | 0.061 |
| Vancomycin16 | -0.032 | -0.016 |
| Rv2680_day32 | -0.061 | 0.036 |
| H37Rv_KO_MarP | 0.312 | 0.047 |
| hypoxia_3wks | -0.459 | 1.053 |
| hypoxia_6wks | -0.785 | 1.29 |
| glycerol | -0.032 | 0.028 |
| cholesterol | 0.007 | -0.36 |
| AJ | -1.62 | 0.482 |
| Bibs02 | -0.742 | 0.501 |
| Bibs02c | 0.455 | 0.255 |
| BL6 | -0.176 | -0.878 |
| BL6a | 0.489 | -0.263 |
| BXD01 | -0.978 | -0.629 |
| BXD010 | -0.157 | 0.323 |
| BXD011 | -0.902 | -0.244 |
| BXD03 | -1.625 | -0.468 |
| BXD04 | -0.611 | -0.444 |
| BXD05 | 0.115 | -0.631 |
| BXD06 | 0.53 | -0.587 |
| BXD07 | -0.756 | -0.385 |
| BXD08 | -1.088 | 0.06 |
| BXD09 | -0.231 | -0.341 |
| CAST | -1.258 | -0.626 |
| CCcont | -1.187 | -0.918 |
| DS01 | -0.977 | 0.075 |
| DS02 | -0.915 | -0.452 |
| DS04 | -0.368 | 1.006 |
| DS0c | -0.424 | -0.275 |
| GP01 | -0.621 | 0.481 |
| GP02 | 0.942 | 1.492 |
| GP0c | -0.948 | 0.488 |
| NOD | -2.291 | 0.55 |
| NZO | -1.585 | 0.107 |
| PWK | -0.473 | 0.27 |
| H37Rv_KO_CtpC | -1.873 | 0.036 |
| H37Rv_KO_CtpD | -2.091 | -0.122 |
| H37Rv_KO_Rv1272 | -1.075 | 0.547 |
| H37Rv_KO_SugABC | 0.357 | 0.466 |
| H37Rv_KO_MbtN | -0.45 | 1.192 |
| Trans05 | 0.198 | -0.068 |
| macrophage_unactivated | -0.344 | -0.025 |
| IL1 | 0.279 | -0.765 |
| Rapamycin | 0.203 | 0.123 |
| Tcell | 0.485 | -0.189 |
| GMCSF | 1.349 | 0.37 |
| IFNab | -0.305 | -0.1 |
| IFNg | 0.417 | 0.393 |
| IFNg_GMCSF1 | 0.93 | 0.622 |
| Rv1432_day32 | 0.169 | 0.233 |
| Rv1565c_day32 | 0.289 | 0.126 |
| secA2_input | -1.028 | -0.21 |
| delta_Rv3594 | -2.461 | -0.589 |
| delta_Rv3717 | -1.266 | -0.721 |
| delta_Rv3811 | -1.783 | -0.973 |
| delta_Rv0954 | -1.066 | -0.05 |
| PonA1 | -0.682 | -0.466 |
| EccD1_KO | -0.483 | 0.349 |
| EspI_KO | -1.723 | -0.576 |
| PE35_KO | -0.28 | -0.076 |
| PPE68_KO | -0.742 | -0.669 |
| glycerol2 | 0.657 | -0.273 |
| lignocerate | -3.304 | -0.944 |
| oleate | -0.917 | 0.328 |
| phosphatidylcholine | 0.237 | -0.532 |
| acetate | -1.543 | -0.948 |
| glucAc | -2.505 | -1.532 |
| Rv0950ko | 0.648 | 0.748 |
| Rv1096ko | 0.977 | 1.426 |
| Rv3684ko | -0.573 | 0.593 |
| delta_otsA_trehalose | 0.519 | 0.021 |