Top 10 genes with highest correlation to Rv3237c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0902c/prrB | (cc=0.4851) | info on Rv0902c/prrB |
| Rv2218/lipA | (cc=0.4313) | info on Rv2218/lipA |
| Rv2970c/lipN | (cc=0.4087) | info on Rv2970c/lipN |
| Rv2200c/ctaC | (cc=0.3898) | info on Rv2200c/ctaC |
| Rv0446c/- | (cc=0.3869) | info on Rv0446c/- |
| Rv0192/- | (cc=0.3808) | info on Rv0192/- |
| Rv2263/- | (cc=0.3775) | info on Rv2263/- |
| Rv0255c/cobQ1 | (cc=0.3732) | info on Rv0255c/cobQ1 |
| Rv0697/- | (cc=0.3625) | info on Rv0697/- |
| Rv0351/grpE | (cc=0.3535) | info on Rv0351/grpE |
Correlation of Rv3237c/- with Rv2200c/ctaC
Normalized LFCs for Rv3237c/-:
(description and provenance of datasets)
| Rv3237c/- | Rv2200c/ctaC | |
| Fe_supp_jason_reseq | -0.48 | 0.655 |
| low_pH_jason_reseq | -0.139 | -0.137 |
| NO_jason_reseq | -1.643 | -0.953 |
| B6_jason_reseq | -0.18 | 0.246 |
| MHCII_jason_reseq | 0.837 | 0.406 |
| Isoniazid02 | -0.626 | -0.233 |
| Rifampicin4 | -0.19 | -0.433 |
| Ethambutol3 | -0.259 | -0.415 |
| Meropenem3 | -0.704 | -0.528 |
| Vancomycin16 | -0.032 | -0.424 |
| Rv2680_day32 | -0.061 | -0.095 |
| H37Rv_KO_MarP | 0.312 | -0.785 |
| hypoxia_3wks | -0.459 | 0.606 |
| hypoxia_6wks | -0.785 | -0.171 |
| glycerol | -0.032 | 1.033 |
| cholesterol | 0.007 | 0.691 |
| AJ | -1.62 | -0.573 |
| Bibs02 | -0.742 | 0.0 |
| Bibs02c | 0.455 | 0.768 |
| BL6 | -0.176 | 0.067 |
| BL6a | 0.489 | 0.207 |
| BXD01 | -0.978 | -0.322 |
| BXD010 | -0.157 | -0.507 |
| BXD011 | -0.902 | -0.727 |
| BXD03 | -1.625 | -0.772 |
| BXD04 | -0.611 | -0.222 |
| BXD05 | 0.115 | -0.533 |
| BXD06 | 0.53 | 0.205 |
| BXD07 | -0.756 | -0.16 |
| BXD08 | -1.088 | 0.204 |
| BXD09 | -0.231 | 0.621 |
| CAST | -1.258 | -1.106 |
| CCcont | -1.187 | -0.268 |
| DS01 | -0.977 | -0.424 |
| DS02 | -0.915 | -0.862 |
| DS04 | -0.368 | 1.238 |
| DS0c | -0.424 | -0.693 |
| GP01 | -0.621 | -0.662 |
| GP02 | 0.942 | -0.558 |
| GP0c | -0.948 | -0.742 |
| NOD | -2.291 | -0.555 |
| NZO | -1.585 | -0.637 |
| PWK | -0.473 | -0.352 |
| H37Rv_KO_CtpC | -1.873 | -0.401 |
| H37Rv_KO_CtpD | -2.091 | 0.132 |
| H37Rv_KO_Rv1272 | -1.075 | 0.076 |
| H37Rv_KO_SugABC | 0.357 | 1.435 |
| H37Rv_KO_MbtN | -0.45 | 0.854 |
| Trans05 | 0.198 | -0.876 |
| macrophage_unactivated | -0.344 | 0.234 |
| IL1 | 0.279 | -0.736 |
| Rapamycin | 0.203 | 1.215 |
| Tcell | 0.485 | 0.469 |
| GMCSF | 1.349 | -0.422 |
| IFNab | -0.305 | 1.37 |
| IFNg | 0.417 | 1.211 |
| IFNg_GMCSF1 | 0.93 | 0.233 |
| Rv1432_day32 | 0.169 | -0.188 |
| Rv1565c_day32 | 0.289 | -0.218 |
| secA2_input | -1.028 | -1.506 |
| delta_Rv3594 | -2.461 | -0.592 |
| delta_Rv3717 | -1.266 | -0.633 |
| delta_Rv3811 | -1.783 | -0.839 |
| delta_Rv0954 | -1.066 | -1.085 |
| PonA1 | -0.682 | -0.581 |
| EccD1_KO | -0.483 | 0.194 |
| EspI_KO | -1.723 | -0.174 |
| PE35_KO | -0.28 | 0.172 |
| PPE68_KO | -0.742 | -0.195 |
| glycerol2 | 0.657 | -0.775 |
| lignocerate | -3.304 | -0.924 |
| oleate | -0.917 | -0.924 |
| phosphatidylcholine | 0.237 | -0.774 |
| acetate | -1.543 | -0.482 |
| glucAc | -2.505 | -1.176 |
| Rv0950ko | 0.648 | -0.193 |
| Rv1096ko | 0.977 | -0.395 |
| Rv3684ko | -0.573 | 0.2 |
| delta_otsA_trehalose | 0.519 | 0.0 |