Top 10 genes with highest correlation to Rv3237c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0902c/prrB | (cc=0.4851) | info on Rv0902c/prrB |
| Rv2218/lipA | (cc=0.4313) | info on Rv2218/lipA |
| Rv2970c/lipN | (cc=0.4087) | info on Rv2970c/lipN |
| Rv2200c/ctaC | (cc=0.3898) | info on Rv2200c/ctaC |
| Rv0446c/- | (cc=0.3869) | info on Rv0446c/- |
| Rv0192/- | (cc=0.3808) | info on Rv0192/- |
| Rv2263/- | (cc=0.3775) | info on Rv2263/- |
| Rv0255c/cobQ1 | (cc=0.3732) | info on Rv0255c/cobQ1 |
| Rv0697/- | (cc=0.3625) | info on Rv0697/- |
| Rv0351/grpE | (cc=0.3535) | info on Rv0351/grpE |
Correlation of Rv3237c/- with Rv0902c/prrB
Normalized LFCs for Rv3237c/-:
(description and provenance of datasets)
| Rv3237c/- | Rv0902c/prrB | |
| Fe_supp_jason_reseq | -0.48 | 1.725 |
| low_pH_jason_reseq | -0.139 | -0.345 |
| NO_jason_reseq | -1.643 | -0.263 |
| B6_jason_reseq | -0.18 | 0.538 |
| MHCII_jason_reseq | 0.837 | 1.068 |
| Isoniazid02 | -0.626 | 0.383 |
| Rifampicin4 | -0.19 | 0.0 |
| Ethambutol3 | -0.259 | 2.432 |
| Meropenem3 | -0.704 | 0.0 |
| Vancomycin16 | -0.032 | 0.366 |
| Rv2680_day32 | -0.061 | -0.33 |
| H37Rv_KO_MarP | 0.312 | -0.476 |
| hypoxia_3wks | -0.459 | -0.53 |
| hypoxia_6wks | -0.785 | -1.05 |
| glycerol | -0.032 | -0.976 |
| cholesterol | 0.007 | -1.359 |
| AJ | -1.62 | -0.728 |
| Bibs02 | -0.742 | 1.139 |
| Bibs02c | 0.455 | 0.747 |
| BL6 | -0.176 | -0.955 |
| BL6a | 0.489 | 0.653 |
| BXD01 | -0.978 | -0.218 |
| BXD010 | -0.157 | -1.201 |
| BXD011 | -0.902 | 1.041 |
| BXD03 | -1.625 | -0.109 |
| BXD04 | -0.611 | -0.264 |
| BXD05 | 0.115 | 1.3 |
| BXD06 | 0.53 | 0.888 |
| BXD07 | -0.756 | 0.0 |
| BXD08 | -1.088 | 0.321 |
| BXD09 | -0.231 | 0.053 |
| CAST | -1.258 | -1.26 |
| CCcont | -1.187 | 0.574 |
| DS01 | -0.977 | 0.496 |
| DS02 | -0.915 | -0.922 |
| DS04 | -0.368 | -0.937 |
| DS0c | -0.424 | -0.68 |
| GP01 | -0.621 | -0.837 |
| GP02 | 0.942 | -0.705 |
| GP0c | -0.948 | -0.218 |
| NOD | -2.291 | -0.825 |
| NZO | -1.585 | -1.871 |
| PWK | -0.473 | -1.073 |
| H37Rv_KO_CtpC | -1.873 | -1.686 |
| H37Rv_KO_CtpD | -2.091 | -1.188 |
| H37Rv_KO_Rv1272 | -1.075 | 0.25 |
| H37Rv_KO_SugABC | 0.357 | 0.208 |
| H37Rv_KO_MbtN | -0.45 | -0.708 |
| Trans05 | 0.198 | 0.354 |
| macrophage_unactivated | -0.344 | 0.751 |
| IL1 | 0.279 | -0.463 |
| Rapamycin | 0.203 | 1.439 |
| Tcell | 0.485 | 0.567 |
| GMCSF | 1.349 | -0.752 |
| IFNab | -0.305 | 0.323 |
| IFNg | 0.417 | 1.034 |
| IFNg_GMCSF1 | 0.93 | 2.027 |
| Rv1432_day32 | 0.169 | 0.0 |
| Rv1565c_day32 | 0.289 | 0.0 |
| secA2_input | -1.028 | -1.631 |
| delta_Rv3594 | -2.461 | -1.086 |
| delta_Rv3717 | -1.266 | -2.326 |
| delta_Rv3811 | -1.783 | -0.697 |
| delta_Rv0954 | -1.066 | -0.403 |
| PonA1 | -0.682 | -0.249 |
| EccD1_KO | -0.483 | -0.201 |
| EspI_KO | -1.723 | -2.219 |
| PE35_KO | -0.28 | 0.172 |
| PPE68_KO | -0.742 | 0.189 |
| glycerol2 | 0.657 | -0.167 |
| lignocerate | -3.304 | -0.96 |
| oleate | -0.917 | 0.052 |
| phosphatidylcholine | 0.237 | -0.69 |
| acetate | -1.543 | -1.792 |
| glucAc | -2.505 | -1.199 |
| Rv0950ko | 0.648 | 0.669 |
| Rv1096ko | 0.977 | 1.764 |
| Rv3684ko | -0.573 | 0.727 |
| delta_otsA_trehalose | 0.519 | -0.245 |