Top 10 genes with highest correlation to Rv3226c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1181/pks4 | (cc=0.5385) | info on Rv1181/pks4 |
| Rv3354/- | (cc=0.5343) | info on Rv3354/- |
| Rv0089/- | (cc=0.5314) | info on Rv0089/- |
| Rv1563c/treY | (cc=0.5281) | info on Rv1563c/treY |
| Rv0258c/- | (cc=0.5259) | info on Rv0258c/- |
| Rv2007c/fdxA | (cc=0.5055) | info on Rv2007c/fdxA |
| Rv1403c/- | (cc=0.503) | info on Rv1403c/- |
| Rv1864c/- | (cc=0.5013) | info on Rv1864c/- |
| Rv1657/argR | (cc=0.4968) | info on Rv1657/argR |
| Rv2499c/- | (cc=0.4834) | info on Rv2499c/- |
Correlation of Rv3226c/- with Rv3354/-
Normalized LFCs for Rv3226c/-:
(description and provenance of datasets)
| Rv3226c/- | Rv3354/- | |
| Fe_supp_jason_reseq | -0.98 | -1.138 |
| low_pH_jason_reseq | 0.007 | -0.381 |
| NO_jason_reseq | -0.659 | -0.793 |
| B6_jason_reseq | 0.049 | 0.985 |
| MHCII_jason_reseq | 0.088 | 1.019 |
| Isoniazid02 | 0.307 | 1.043 |
| Rifampicin4 | 0.866 | 0.125 |
| Ethambutol3 | 0.103 | 0.398 |
| Meropenem3 | 0.581 | 1.179 |
| Vancomycin16 | 0.615 | 0.162 |
| Rv2680_day32 | -0.076 | 0.659 |
| H37Rv_KO_MarP | 0.336 | 0.422 |
| hypoxia_3wks | -0.112 | -0.347 |
| hypoxia_6wks | -0.322 | -0.595 |
| glycerol | 0.171 | 0.674 |
| cholesterol | 0.663 | 0.892 |
| AJ | 0.208 | -0.171 |
| Bibs02 | -0.156 | -0.029 |
| Bibs02c | -0.241 | 0.596 |
| BL6 | -0.683 | -0.912 |
| BL6a | -0.456 | -0.067 |
| BXD01 | -1.304 | -1.687 |
| BXD010 | -0.206 | -1.434 |
| BXD011 | -1.369 | -2.812 |
| BXD03 | -0.491 | -2.487 |
| BXD04 | -1.268 | -1.729 |
| BXD05 | -0.062 | -1.146 |
| BXD06 | -0.806 | -1.932 |
| BXD07 | -0.77 | -2.262 |
| BXD08 | -0.932 | -1.667 |
| BXD09 | -0.935 | -2.542 |
| CAST | 0.44 | 0.097 |
| CCcont | -1.426 | -1.82 |
| DS01 | 0.457 | -0.077 |
| DS02 | 0.996 | 0.269 |
| DS04 | 0.864 | 0.395 |
| DS0c | 1.325 | -0.597 |
| GP01 | 0.232 | -1.486 |
| GP02 | -1.083 | -0.295 |
| GP0c | -0.62 | -0.754 |
| NOD | 0.013 | -0.169 |
| NZO | -0.163 | 0.127 |
| PWK | 0.537 | 0.367 |
| H37Rv_KO_CtpC | 0.281 | -0.788 |
| H37Rv_KO_CtpD | -1.073 | -1.146 |
| H37Rv_KO_Rv1272 | -0.536 | -0.927 |
| H37Rv_KO_SugABC | 0.712 | -0.855 |
| H37Rv_KO_MbtN | -1.432 | -1.624 |
| Trans05 | 0.012 | -0.244 |
| macrophage_unactivated | -1.657 | -1.654 |
| IL1 | 0.252 | -1.649 |
| Rapamycin | -0.368 | -1.034 |
| Tcell | -0.319 | -1.473 |
| GMCSF | -0.436 | -2.118 |
| IFNab | -0.296 | -2.056 |
| IFNg | 0.97 | -0.949 |
| IFNg_GMCSF1 | 1.04 | -0.641 |
| Rv1432_day32 | -1.484 | 0.3 |
| Rv1565c_day32 | -0.33 | 0.635 |
| secA2_input | -0.457 | 0.645 |
| delta_Rv3594 | 0.587 | -0.395 |
| delta_Rv3717 | 0.221 | -0.21 |
| delta_Rv3811 | 0.315 | 0.592 |
| delta_Rv0954 | -0.225 | 0.58 |
| PonA1 | -0.474 | -0.802 |
| EccD1_KO | 0.086 | 1.217 |
| EspI_KO | 0.442 | 1.201 |
| PE35_KO | 0.114 | 0.204 |
| PPE68_KO | -0.147 | 1.254 |
| glycerol2 | 0.552 | 1.595 |
| lignocerate | 0.887 | 1.672 |
| oleate | -0.549 | 0.822 |
| phosphatidylcholine | 0.49 | 1.291 |
| acetate | 0.6 | 1.047 |
| glucAc | 0.634 | 1.449 |
| Rv0950ko | -0.621 | 0.365 |
| Rv1096ko | -0.256 | 0.268 |
| Rv3684ko | -0.491 | 0.933 |
| delta_otsA_trehalose | 2.308 | 0.808 |