Top 10 genes with highest correlation to Rv3226c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1181/pks4 | (cc=0.5385) | info on Rv1181/pks4 |
| Rv3354/- | (cc=0.5343) | info on Rv3354/- |
| Rv0089/- | (cc=0.5314) | info on Rv0089/- |
| Rv1563c/treY | (cc=0.5281) | info on Rv1563c/treY |
| Rv0258c/- | (cc=0.5259) | info on Rv0258c/- |
| Rv2007c/fdxA | (cc=0.5055) | info on Rv2007c/fdxA |
| Rv1403c/- | (cc=0.503) | info on Rv1403c/- |
| Rv1864c/- | (cc=0.5013) | info on Rv1864c/- |
| Rv1657/argR | (cc=0.4968) | info on Rv1657/argR |
| Rv2499c/- | (cc=0.4834) | info on Rv2499c/- |
Correlation of Rv3226c/- with Rv1181/pks4
Normalized LFCs for Rv3226c/-:
(description and provenance of datasets)
| Rv3226c/- | Rv1181/pks4 | |
| Fe_supp_jason_reseq | -0.98 | -0.508 |
| low_pH_jason_reseq | 0.007 | 0.179 |
| NO_jason_reseq | -0.659 | -0.564 |
| B6_jason_reseq | 0.049 | 1.952 |
| MHCII_jason_reseq | 0.088 | 2.203 |
| Isoniazid02 | 0.307 | 0.244 |
| Rifampicin4 | 0.866 | -0.165 |
| Ethambutol3 | 0.103 | 0.687 |
| Meropenem3 | 0.581 | 0.137 |
| Vancomycin16 | 0.615 | 0.255 |
| Rv2680_day32 | -0.076 | -0.253 |
| H37Rv_KO_MarP | 0.336 | 0.21 |
| hypoxia_3wks | -0.112 | -0.283 |
| hypoxia_6wks | -0.322 | -0.088 |
| glycerol | 0.171 | 0.721 |
| cholesterol | 0.663 | 0.512 |
| AJ | 0.208 | 0.508 |
| Bibs02 | -0.156 | 0.011 |
| Bibs02c | -0.241 | -0.035 |
| BL6 | -0.683 | -1.076 |
| BL6a | -0.456 | -0.562 |
| BXD01 | -1.304 | -2.015 |
| BXD010 | -0.206 | -0.893 |
| BXD011 | -1.369 | -1.018 |
| BXD03 | -0.491 | -1.344 |
| BXD04 | -1.268 | -1.303 |
| BXD05 | -0.062 | -0.967 |
| BXD06 | -0.806 | -1.624 |
| BXD07 | -0.77 | -1.523 |
| BXD08 | -0.932 | -1.691 |
| BXD09 | -0.935 | -1.545 |
| CAST | 0.44 | -0.025 |
| CCcont | -1.426 | -1.157 |
| DS01 | 0.457 | 0.026 |
| DS02 | 0.996 | -0.098 |
| DS04 | 0.864 | -0.468 |
| DS0c | 1.325 | -0.061 |
| GP01 | 0.232 | -1.655 |
| GP02 | -1.083 | -1.466 |
| GP0c | -0.62 | -1.95 |
| NOD | 0.013 | 0.259 |
| NZO | -0.163 | 0.107 |
| PWK | 0.537 | 0.638 |
| H37Rv_KO_CtpC | 0.281 | -1.24 |
| H37Rv_KO_CtpD | -1.073 | -1.259 |
| H37Rv_KO_Rv1272 | -0.536 | -1.596 |
| H37Rv_KO_SugABC | 0.712 | -0.505 |
| H37Rv_KO_MbtN | -1.432 | -0.472 |
| Trans05 | 0.012 | -0.869 |
| macrophage_unactivated | -1.657 | -1.973 |
| IL1 | 0.252 | -0.169 |
| Rapamycin | -0.368 | 0.034 |
| Tcell | -0.319 | -2.512 |
| GMCSF | -0.436 | -1.838 |
| IFNab | -0.296 | -0.822 |
| IFNg | 0.97 | -0.764 |
| IFNg_GMCSF1 | 1.04 | -0.77 |
| Rv1432_day32 | -1.484 | -0.459 |
| Rv1565c_day32 | -0.33 | -0.63 |
| secA2_input | -0.457 | -0.373 |
| delta_Rv3594 | 0.587 | 0.416 |
| delta_Rv3717 | 0.221 | -0.106 |
| delta_Rv3811 | 0.315 | 0.193 |
| delta_Rv0954 | -0.225 | -0.305 |
| PonA1 | -0.474 | -0.235 |
| EccD1_KO | 0.086 | -0.776 |
| EspI_KO | 0.442 | -0.673 |
| PE35_KO | 0.114 | -0.16 |
| PPE68_KO | -0.147 | -0.269 |
| glycerol2 | 0.552 | -0.144 |
| lignocerate | 0.887 | 1.277 |
| oleate | -0.549 | -0.865 |
| phosphatidylcholine | 0.49 | -0.024 |
| acetate | 0.6 | 0.309 |
| glucAc | 0.634 | 0.363 |
| Rv0950ko | -0.621 | -0.084 |
| Rv1096ko | -0.256 | 1.294 |
| Rv3684ko | -0.491 | 0.265 |
| delta_otsA_trehalose | 2.308 | 1.196 |