Top 10 genes with highest correlation to Rv3205c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3630/- | (cc=0.5352) | info on Rv3630/- |
| Rv2197c/- | (cc=0.5333) | info on Rv2197c/- |
| Rv1101c/- | (cc=0.51) | info on Rv1101c/- |
| Rv1159/pimE | (cc=0.4931) | info on Rv1159/pimE |
| Rv0466/- | (cc=0.4863) | info on Rv0466/- |
| Rv0050/ponA1 | (cc=0.4857) | info on Rv0050/ponA1 |
| Rv0999/- | (cc=0.458) | info on Rv0999/- |
| Rv3671c/- | (cc=0.4541) | info on Rv3671c/- |
| Rv1566c/- | (cc=0.4527) | info on Rv1566c/- |
| Rv2363/amiA2 | (cc=0.4396) | info on Rv2363/amiA2 |
Correlation of Rv3205c/- with Rv2363/amiA2
Normalized LFCs for Rv3205c/-:
(description and provenance of datasets)
| Rv3205c/- | Rv2363/amiA2 | |
| Fe_supp_jason_reseq | 0.398 | 2.878 |
| low_pH_jason_reseq | -1.35 | -0.634 |
| NO_jason_reseq | -2.625 | -0.633 |
| B6_jason_reseq | -0.895 | -0.421 |
| MHCII_jason_reseq | 0.637 | 1.355 |
| Isoniazid02 | -0.418 | -2.015 |
| Rifampicin4 | -1.801 | -5.334 |
| Ethambutol3 | -1.2 | 0.556 |
| Meropenem3 | -1.277 | -2.857 |
| Vancomycin16 | -3.13 | -3.892 |
| Rv2680_day32 | -0.548 | -0.89 |
| H37Rv_KO_MarP | -2.379 | -3.586 |
| hypoxia_3wks | 1.527 | -0.989 |
| hypoxia_6wks | 0.393 | -1.934 |
| glycerol | 0.671 | 1.138 |
| cholesterol | 0.15 | 1.12 |
| AJ | -1.222 | -0.373 |
| Bibs02 | -1.491 | 1.658 |
| Bibs02c | 0.336 | 2.025 |
| BL6 | -1.144 | 0.119 |
| BL6a | 0.244 | 0.739 |
| BXD01 | 0.643 | -0.136 |
| BXD010 | -0.086 | 0.062 |
| BXD011 | 0.157 | -0.133 |
| BXD03 | 0.428 | -1.048 |
| BXD04 | -0.409 | -0.723 |
| BXD05 | 0.665 | -0.14 |
| BXD06 | 0.138 | -0.669 |
| BXD07 | 0.274 | -0.144 |
| BXD08 | 0.62 | 0.297 |
| BXD09 | 0.303 | -0.31 |
| CAST | -0.322 | -1.155 |
| CCcont | -0.365 | 2.288 |
| DS01 | -0.643 | 0.431 |
| DS02 | 0.137 | 1.226 |
| DS04 | 0.419 | -0.202 |
| DS0c | 0.047 | 1.677 |
| GP01 | -0.633 | 0.26 |
| GP02 | 1.486 | -0.486 |
| GP0c | -0.639 | 0.485 |
| NOD | -1.183 | -0.789 |
| NZO | -1.445 | -0.845 |
| PWK | -1.179 | -1.147 |
| H37Rv_KO_CtpC | -0.187 | 1.007 |
| H37Rv_KO_CtpD | -0.208 | 0.819 |
| H37Rv_KO_Rv1272 | -1.219 | 0.134 |
| H37Rv_KO_SugABC | 1.086 | 0.918 |
| H37Rv_KO_MbtN | 1.418 | 0.61 |
| Trans05 | 1.339 | 0.698 |
| macrophage_unactivated | 0.537 | 2.468 |
| IL1 | 0.658 | -0.356 |
| Rapamycin | -0.285 | 0.0 |
| Tcell | 0.639 | -1.29 |
| GMCSF | -0.246 | -0.156 |
| IFNab | -0.481 | 1.076 |
| IFNg | 0.307 | -0.861 |
| IFNg_GMCSF1 | -0.292 | 0.349 |
| Rv1432_day32 | -0.263 | -0.13 |
| Rv1565c_day32 | 1.579 | 1.164 |
| secA2_input | -0.822 | -0.178 |
| delta_Rv3594 | 0.13 | 1.465 |
| delta_Rv3717 | 0.036 | 1.31 |
| delta_Rv3811 | -0.134 | 1.487 |
| delta_Rv0954 | 0.774 | 1.2 |
| PonA1 | -0.601 | 0.238 |
| EccD1_KO | -2.23 | -0.592 |
| EspI_KO | 0.117 | 0.553 |
| PE35_KO | 0.385 | 0.793 |
| PPE68_KO | -0.368 | 1.264 |
| glycerol2 | -0.104 | 0.189 |
| lignocerate | -1.253 | 0.856 |
| oleate | -0.7 | 0.116 |
| phosphatidylcholine | -0.104 | -0.253 |
| acetate | 0.023 | 0.924 |
| glucAc | -1.899 | 0.217 |
| Rv0950ko | -0.651 | -3.54 |
| Rv1096ko | -0.112 | -1.858 |
| Rv3684ko | 2.636 | 1.408 |
| delta_otsA_trehalose | 0.578 | 0.648 |