Top 10 genes with highest correlation to Rv3205c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3630/- | (cc=0.5352) | info on Rv3630/- |
| Rv2197c/- | (cc=0.5333) | info on Rv2197c/- |
| Rv1101c/- | (cc=0.51) | info on Rv1101c/- |
| Rv1159/pimE | (cc=0.4931) | info on Rv1159/pimE |
| Rv0466/- | (cc=0.4863) | info on Rv0466/- |
| Rv0050/ponA1 | (cc=0.4857) | info on Rv0050/ponA1 |
| Rv0999/- | (cc=0.458) | info on Rv0999/- |
| Rv3671c/- | (cc=0.4541) | info on Rv3671c/- |
| Rv1566c/- | (cc=0.4527) | info on Rv1566c/- |
| Rv2363/amiA2 | (cc=0.4396) | info on Rv2363/amiA2 |
Correlation of Rv3205c/- with Rv2197c/-
Normalized LFCs for Rv3205c/-:
(description and provenance of datasets)
| Rv3205c/- | Rv2197c/- | |
| Fe_supp_jason_reseq | 0.398 | -0.458 |
| low_pH_jason_reseq | -1.35 | -0.192 |
| NO_jason_reseq | -2.625 | -1.641 |
| B6_jason_reseq | -0.895 | 0.678 |
| MHCII_jason_reseq | 0.637 | 0.414 |
| Isoniazid02 | -0.418 | 0.806 |
| Rifampicin4 | -1.801 | -3.041 |
| Ethambutol3 | -1.2 | -0.494 |
| Meropenem3 | -1.277 | -1.329 |
| Vancomycin16 | -3.13 | -4.067 |
| Rv2680_day32 | -0.548 | 1.061 |
| H37Rv_KO_MarP | -2.379 | -1.49 |
| hypoxia_3wks | 1.527 | 0.283 |
| hypoxia_6wks | 0.393 | 1.159 |
| glycerol | 0.671 | -0.79 |
| cholesterol | 0.15 | -0.371 |
| AJ | -1.222 | -0.771 |
| Bibs02 | -1.491 | -0.166 |
| Bibs02c | 0.336 | -1.129 |
| BL6 | -1.144 | 0.49 |
| BL6a | 0.244 | -0.042 |
| BXD01 | 0.643 | 0.158 |
| BXD010 | -0.086 | 0.675 |
| BXD011 | 0.157 | 1.053 |
| BXD03 | 0.428 | -0.412 |
| BXD04 | -0.409 | -0.477 |
| BXD05 | 0.665 | 0.07 |
| BXD06 | 0.138 | 0.354 |
| BXD07 | 0.274 | 0.523 |
| BXD08 | 0.62 | 0.591 |
| BXD09 | 0.303 | 0.534 |
| CAST | -0.322 | -1.103 |
| CCcont | -0.365 | 0.142 |
| DS01 | -0.643 | -1.391 |
| DS02 | 0.137 | 0.017 |
| DS04 | 0.419 | -1.185 |
| DS0c | 0.047 | 0.349 |
| GP01 | -0.633 | 1.47 |
| GP02 | 1.486 | 0.632 |
| GP0c | -0.639 | 0.571 |
| NOD | -1.183 | -1.811 |
| NZO | -1.445 | -0.841 |
| PWK | -1.179 | -2.663 |
| H37Rv_KO_CtpC | -0.187 | -0.911 |
| H37Rv_KO_CtpD | -0.208 | 0.384 |
| H37Rv_KO_Rv1272 | -1.219 | 0.106 |
| H37Rv_KO_SugABC | 1.086 | -0.126 |
| H37Rv_KO_MbtN | 1.418 | 0.676 |
| Trans05 | 1.339 | 0.666 |
| macrophage_unactivated | 0.537 | -0.862 |
| IL1 | 0.658 | 0.306 |
| Rapamycin | -0.285 | 0.034 |
| Tcell | 0.639 | -2.203 |
| GMCSF | -0.246 | -0.211 |
| IFNab | -0.481 | 0.665 |
| IFNg | 0.307 | 0.275 |
| IFNg_GMCSF1 | -0.292 | 0.104 |
| Rv1432_day32 | -0.263 | 1.624 |
| Rv1565c_day32 | 1.579 | 2.647 |
| secA2_input | -0.822 | -0.584 |
| delta_Rv3594 | 0.13 | 0.788 |
| delta_Rv3717 | 0.036 | 1.402 |
| delta_Rv3811 | -0.134 | 1.071 |
| delta_Rv0954 | 0.774 | 0.225 |
| PonA1 | -0.601 | -1.334 |
| EccD1_KO | -2.23 | -1.983 |
| EspI_KO | 0.117 | -0.234 |
| PE35_KO | 0.385 | -1.155 |
| PPE68_KO | -0.368 | -1.517 |
| glycerol2 | -0.104 | -0.764 |
| lignocerate | -1.253 | -0.451 |
| oleate | -0.7 | -0.146 |
| phosphatidylcholine | -0.104 | -1.242 |
| acetate | 0.023 | -0.015 |
| glucAc | -1.899 | -0.535 |
| Rv0950ko | -0.651 | -0.045 |
| Rv1096ko | -0.112 | -0.072 |
| Rv3684ko | 2.636 | 1.012 |
| delta_otsA_trehalose | 0.578 | -0.717 |