Top 10 genes with highest correlation to Rv3173c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3208A/TB9.4 | (cc=0.5277) | info on Rv3208A/TB9.4 |
| Rv2240c/- | (cc=0.5274) | info on Rv2240c/- |
| Rv3127/- | (cc=0.4928) | info on Rv3127/- |
| Rv2019/- | (cc=0.4926) | info on Rv2019/- |
| Rv2613c/- | (cc=0.4916) | info on Rv2613c/- |
| Rv3780/- | (cc=0.4636) | info on Rv3780/- |
| Rv2621c/- | (cc=0.4571) | info on Rv2621c/- |
| Rv1958c/- | (cc=0.4547) | info on Rv1958c/- |
| Rv2426c/- | (cc=0.4542) | info on Rv2426c/- |
| Rv2237/- | (cc=0.4537) | info on Rv2237/- |
Correlation of Rv3173c/- with Rv3780/-
Normalized LFCs for Rv3173c/-:
(description and provenance of datasets)
| Rv3173c/- | Rv3780/- | |
| Fe_supp_jason_reseq | 0.33 | 0.0 |
| low_pH_jason_reseq | 1.35 | 0.0 |
| NO_jason_reseq | 1.376 | 0.0 |
| B6_jason_reseq | -0.395 | 0.0 |
| MHCII_jason_reseq | -0.293 | 0.0 |
| Isoniazid02 | -0.409 | -0.383 |
| Rifampicin4 | 0.921 | -0.341 |
| Ethambutol3 | 0.286 | -0.153 |
| Meropenem3 | 0.765 | -0.315 |
| Vancomycin16 | 0.541 | -0.698 |
| Rv2680_day32 | -0.275 | 0.0 |
| H37Rv_KO_MarP | 0.205 | 1.936 |
| hypoxia_3wks | -0.239 | -1.049 |
| hypoxia_6wks | 0.0 | -0.549 |
| glycerol | -1.758 | -0.202 |
| cholesterol | -1.049 | 0.659 |
| AJ | -1.203 | -0.232 |
| Bibs02 | -1.244 | -0.183 |
| Bibs02c | 0.79 | 0.527 |
| BL6 | 0.082 | 0.569 |
| BL6a | 1.171 | 0.346 |
| BXD01 | -0.494 | 0.0 |
| BXD010 | 0.111 | 0.0 |
| BXD011 | 0.965 | 0.727 |
| BXD03 | -1.25 | -0.135 |
| BXD04 | -0.641 | 0.0 |
| BXD05 | -1.486 | 0.0 |
| BXD06 | -0.422 | 0.0 |
| BXD07 | -0.619 | 0.0 |
| BXD08 | -0.341 | 0.521 |
| BXD09 | 0.637 | 0.128 |
| CAST | -1.668 | -0.23 |
| CCcont | 1.389 | 1.934 |
| DS01 | -0.407 | -0.236 |
| DS02 | -0.101 | -0.217 |
| DS04 | -1.32 | 0.0 |
| DS0c | 0.64 | 1.354 |
| GP01 | -0.144 | 0.0 |
| GP02 | -0.401 | -0.083 |
| GP0c | 0.338 | 0.0 |
| NOD | 0.918 | -0.225 |
| NZO | -1.035 | -0.199 |
| PWK | -0.809 | 0.342 |
| H37Rv_KO_CtpC | -0.564 | 1.759 |
| H37Rv_KO_CtpD | -1.398 | 0.221 |
| H37Rv_KO_Rv1272 | 0.701 | 0.553 |
| H37Rv_KO_SugABC | -1.16 | 0.0 |
| H37Rv_KO_MbtN | -0.897 | 0.18 |
| Trans05 | -0.335 | 0.0 |
| macrophage_unactivated | -0.625 | 0.83 |
| IL1 | -0.056 | 0.0 |
| Rapamycin | -0.875 | 0.0 |
| Tcell | -1.558 | 0.0 |
| GMCSF | 0.417 | 0.0 |
| IFNab | 0.375 | 0.0 |
| IFNg | -0.152 | 0.369 |
| IFNg_GMCSF1 | -0.896 | 0.0 |
| Rv1432_day32 | -0.085 | 0.052 |
| Rv1565c_day32 | -0.224 | 0.0 |
| secA2_input | 0.967 | -0.568 |
| delta_Rv3594 | 0.895 | 0.281 |
| delta_Rv3717 | 0.0 | 0.232 |
| delta_Rv3811 | 0.3 | -0.315 |
| delta_Rv0954 | -1.031 | -0.981 |
| PonA1 | -1.633 | -0.53 |
| EccD1_KO | -1.256 | -0.921 |
| EspI_KO | 0.057 | -0.799 |
| PE35_KO | 0.974 | -0.254 |
| PPE68_KO | 1.808 | 1.59 |
| glycerol2 | 0.657 | 1.684 |
| lignocerate | 1.723 | 2.097 |
| oleate | -2.783 | 0.0 |
| phosphatidylcholine | 1.689 | 1.499 |
| acetate | 2.942 | 3.004 |
| glucAc | 2.94 | 2.859 |
| Rv0950ko | 0.0 | 0.621 |
| Rv1096ko | -0.769 | 0.323 |
| Rv3684ko | 0.707 | -0.377 |
| delta_otsA_trehalose | -0.096 | -3.775 |