Top 10 genes with highest correlation to Rv3173c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3208A/TB9.4 | (cc=0.5277) | info on Rv3208A/TB9.4 |
| Rv2240c/- | (cc=0.5274) | info on Rv2240c/- |
| Rv3127/- | (cc=0.4928) | info on Rv3127/- |
| Rv2019/- | (cc=0.4926) | info on Rv2019/- |
| Rv2613c/- | (cc=0.4916) | info on Rv2613c/- |
| Rv3780/- | (cc=0.4636) | info on Rv3780/- |
| Rv2621c/- | (cc=0.4571) | info on Rv2621c/- |
| Rv1958c/- | (cc=0.4547) | info on Rv1958c/- |
| Rv2426c/- | (cc=0.4542) | info on Rv2426c/- |
| Rv2237/- | (cc=0.4537) | info on Rv2237/- |
Correlation of Rv3173c/- with Rv2613c/-
Normalized LFCs for Rv3173c/-:
(description and provenance of datasets)
| Rv3173c/- | Rv2613c/- | |
| Fe_supp_jason_reseq | 0.33 | 0.268 |
| low_pH_jason_reseq | 1.35 | -1.884 |
| NO_jason_reseq | 1.376 | -2.956 |
| B6_jason_reseq | -0.395 | -1.402 |
| MHCII_jason_reseq | -0.293 | -1.234 |
| Isoniazid02 | -0.409 | -2.196 |
| Rifampicin4 | 0.921 | 0.401 |
| Ethambutol3 | 0.286 | 1.093 |
| Meropenem3 | 0.765 | -0.61 |
| Vancomycin16 | 0.541 | 0.0 |
| Rv2680_day32 | -0.275 | -2.64 |
| H37Rv_KO_MarP | 0.205 | 2.047 |
| hypoxia_3wks | -0.239 | -3.102 |
| hypoxia_6wks | 0.0 | -2.637 |
| glycerol | -1.758 | -0.136 |
| cholesterol | -1.049 | -1.687 |
| AJ | -1.203 | -2.005 |
| Bibs02 | -1.244 | -2.905 |
| Bibs02c | 0.79 | -0.455 |
| BL6 | 0.082 | -2.084 |
| BL6a | 1.171 | -0.729 |
| BXD01 | -0.494 | -2.527 |
| BXD010 | 0.111 | -2.485 |
| BXD011 | 0.965 | -1.765 |
| BXD03 | -1.25 | -2.623 |
| BXD04 | -0.641 | -2.399 |
| BXD05 | -1.486 | -2.477 |
| BXD06 | -0.422 | -2.457 |
| BXD07 | -0.619 | -2.686 |
| BXD08 | -0.341 | -2.58 |
| BXD09 | 0.637 | -2.726 |
| CAST | -1.668 | -3.337 |
| CCcont | 1.389 | -0.355 |
| DS01 | -0.407 | -3.273 |
| DS02 | -0.101 | -3.297 |
| DS04 | -1.32 | -2.572 |
| DS0c | 0.64 | 0.919 |
| GP01 | -0.144 | -1.915 |
| GP02 | -0.401 | -1.614 |
| GP0c | 0.338 | -2.522 |
| NOD | 0.918 | -1.627 |
| NZO | -1.035 | -3.024 |
| PWK | -0.809 | -2.718 |
| H37Rv_KO_CtpC | -0.564 | -1.813 |
| H37Rv_KO_CtpD | -1.398 | -2.457 |
| H37Rv_KO_Rv1272 | 0.701 | -2.736 |
| H37Rv_KO_SugABC | -1.16 | -1.015 |
| H37Rv_KO_MbtN | -0.897 | -1.803 |
| Trans05 | -0.335 | -1.397 |
| macrophage_unactivated | -0.625 | 0.537 |
| IL1 | -0.056 | -2.011 |
| Rapamycin | -0.875 | -0.592 |
| Tcell | -1.558 | -0.629 |
| GMCSF | 0.417 | -0.792 |
| IFNab | 0.375 | -1.636 |
| IFNg | -0.152 | -1.812 |
| IFNg_GMCSF1 | -0.896 | -0.943 |
| Rv1432_day32 | -0.085 | 0.0 |
| Rv1565c_day32 | -0.224 | 2.003 |
| secA2_input | 0.967 | -0.751 |
| delta_Rv3594 | 0.895 | 1.059 |
| delta_Rv3717 | 0.0 | -0.668 |
| delta_Rv3811 | 0.3 | 0.0 |
| delta_Rv0954 | -1.031 | -0.398 |
| PonA1 | -1.633 | -1.592 |
| EccD1_KO | -1.256 | 1.924 |
| EspI_KO | 0.057 | 0.419 |
| PE35_KO | 0.974 | 0.939 |
| PPE68_KO | 1.808 | 1.286 |
| glycerol2 | 0.657 | 1.684 |
| lignocerate | 1.723 | 3.801 |
| oleate | -2.783 | 0.0 |
| phosphatidylcholine | 1.689 | 2.899 |
| acetate | 2.942 | 4.337 |
| glucAc | 2.94 | 3.342 |
| Rv0950ko | 0.0 | -1.013 |
| Rv1096ko | -0.769 | 0.16 |
| Rv3684ko | 0.707 | 0.891 |
| delta_otsA_trehalose | -0.096 | -1.204 |