Top 10 genes with highest correlation to Rv3173c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3208A/TB9.4 | (cc=0.5277) | info on Rv3208A/TB9.4 |
| Rv2240c/- | (cc=0.5274) | info on Rv2240c/- |
| Rv3127/- | (cc=0.4928) | info on Rv3127/- |
| Rv2019/- | (cc=0.4926) | info on Rv2019/- |
| Rv2613c/- | (cc=0.4916) | info on Rv2613c/- |
| Rv3780/- | (cc=0.4636) | info on Rv3780/- |
| Rv2621c/- | (cc=0.4571) | info on Rv2621c/- |
| Rv1958c/- | (cc=0.4547) | info on Rv1958c/- |
| Rv2426c/- | (cc=0.4542) | info on Rv2426c/- |
| Rv2237/- | (cc=0.4537) | info on Rv2237/- |
Correlation of Rv3173c/- with Rv3208A/TB9.4
Normalized LFCs for Rv3173c/-:
(description and provenance of datasets)
| Rv3173c/- | Rv3208A/TB9.4 | |
| Fe_supp_jason_reseq | 0.33 | 2.398 |
| low_pH_jason_reseq | 1.35 | 0.694 |
| NO_jason_reseq | 1.376 | -0.263 |
| B6_jason_reseq | -0.395 | 1.57 |
| MHCII_jason_reseq | -0.293 | 0.929 |
| Isoniazid02 | -0.409 | -0.518 |
| Rifampicin4 | 0.921 | 0.826 |
| Ethambutol3 | 0.286 | 2.476 |
| Meropenem3 | 0.765 | 0.126 |
| Vancomycin16 | 0.541 | 0.783 |
| Rv2680_day32 | -0.275 | 0.442 |
| H37Rv_KO_MarP | 0.205 | 1.016 |
| hypoxia_3wks | -0.239 | -1.882 |
| hypoxia_6wks | 0.0 | -1.633 |
| glycerol | -1.758 | 0.549 |
| cholesterol | -1.049 | 0.952 |
| AJ | -1.203 | -1.264 |
| Bibs02 | -1.244 | -0.898 |
| Bibs02c | 0.79 | 0.887 |
| BL6 | 0.082 | -0.948 |
| BL6a | 1.171 | 1.267 |
| BXD01 | -0.494 | -0.479 |
| BXD010 | 0.111 | -1.775 |
| BXD011 | 0.965 | -0.226 |
| BXD03 | -1.25 | -1.273 |
| BXD04 | -0.641 | -1.268 |
| BXD05 | -1.486 | -1.38 |
| BXD06 | -0.422 | -0.967 |
| BXD07 | -0.619 | -1.096 |
| BXD08 | -0.341 | -1.688 |
| BXD09 | 0.637 | -1.267 |
| CAST | -1.668 | -1.255 |
| CCcont | 1.389 | 1.69 |
| DS01 | -0.407 | -0.71 |
| DS02 | -0.101 | -0.607 |
| DS04 | -1.32 | -0.76 |
| DS0c | 0.64 | 0.267 |
| GP01 | -0.144 | 0.559 |
| GP02 | -0.401 | -0.603 |
| GP0c | 0.338 | 0.796 |
| NOD | 0.918 | 0.877 |
| NZO | -1.035 | 0.217 |
| PWK | -0.809 | -0.816 |
| H37Rv_KO_CtpC | -0.564 | 0.421 |
| H37Rv_KO_CtpD | -1.398 | 0.509 |
| H37Rv_KO_Rv1272 | 0.701 | 1.508 |
| H37Rv_KO_SugABC | -1.16 | 1.283 |
| H37Rv_KO_MbtN | -0.897 | -1.428 |
| Trans05 | -0.335 | 1.464 |
| macrophage_unactivated | -0.625 | -0.316 |
| IL1 | -0.056 | -2.029 |
| Rapamycin | -0.875 | -0.988 |
| Tcell | -1.558 | -0.215 |
| GMCSF | 0.417 | -0.544 |
| IFNab | 0.375 | -0.2 |
| IFNg | -0.152 | -1.438 |
| IFNg_GMCSF1 | -0.896 | -2.85 |
| Rv1432_day32 | -0.085 | -0.314 |
| Rv1565c_day32 | -0.224 | 2.132 |
| secA2_input | 0.967 | -2.134 |
| delta_Rv3594 | 0.895 | 3.706 |
| delta_Rv3717 | 0.0 | 2.44 |
| delta_Rv3811 | 0.3 | 2.235 |
| delta_Rv0954 | -1.031 | 2.571 |
| PonA1 | -1.633 | 0.794 |
| EccD1_KO | -1.256 | 0.52 |
| EspI_KO | 0.057 | 0.821 |
| PE35_KO | 0.974 | 1.12 |
| PPE68_KO | 1.808 | 2.259 |
| glycerol2 | 0.657 | 3.174 |
| lignocerate | 1.723 | 2.649 |
| oleate | -2.783 | -2.12 |
| phosphatidylcholine | 1.689 | 2.465 |
| acetate | 2.942 | 4.178 |
| glucAc | 2.94 | 3.653 |
| Rv0950ko | 0.0 | -1.167 |
| Rv1096ko | -0.769 | -0.585 |
| Rv3684ko | 0.707 | 0.802 |
| delta_otsA_trehalose | -0.096 | 0.955 |