Top 10 genes with highest correlation to Rv3166c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2452c/- | (cc=0.6893) | info on Rv2452c/- |
| Rv0501/galE2 | (cc=0.6028) | info on Rv0501/galE2 |
| Rv0371c/- | (cc=0.589) | info on Rv0371c/- |
| Rv2548/vapC19 | (cc=0.5851) | info on Rv2548/vapC19 |
| Rv2584c/apt | (cc=0.562) | info on Rv2584c/apt |
| Rv1831/- | (cc=0.5606) | info on Rv1831/- |
| Rv1505c/- | (cc=0.5566) | info on Rv1505c/- |
| Rv1583c/- | (cc=0.5531) | info on Rv1583c/- |
| Rv2500c/fadE19 | (cc=0.5521) | info on Rv2500c/fadE19 |
| Rv2818c/- | (cc=0.5391) | info on Rv2818c/- |
Correlation of Rv3166c/- with Rv2452c/-
Normalized LFCs for Rv3166c/-:
(description and provenance of datasets)
| Rv3166c/- | Rv2452c/- | |
| Fe_supp_jason_reseq | 1.028 | 0.96 |
| low_pH_jason_reseq | 0.482 | -0.964 |
| NO_jason_reseq | 0.087 | -1.313 |
| B6_jason_reseq | -1.11 | -0.583 |
| MHCII_jason_reseq | -0.193 | -0.223 |
| Isoniazid02 | 0.412 | -0.036 |
| Rifampicin4 | -0.073 | -1.719 |
| Ethambutol3 | 0.501 | 0.01 |
| Meropenem3 | 0.214 | -0.561 |
| Vancomycin16 | 0.21 | -0.738 |
| Rv2680_day32 | 0.781 | 0.925 |
| H37Rv_KO_MarP | 0.183 | -0.621 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | -0.336 | -1.741 |
| glycerol | 0.803 | 0.0 |
| cholesterol | 0.497 | 0.879 |
| AJ | 0.861 | 0.336 |
| Bibs02 | -0.621 | -0.923 |
| Bibs02c | 1.303 | -0.841 |
| BL6 | 1.769 | 1.436 |
| BL6a | 2.045 | 1.722 |
| BXD01 | 1.207 | 0.958 |
| BXD010 | 0.811 | 0.495 |
| BXD011 | 1.128 | 1.58 |
| BXD03 | 1.462 | 1.511 |
| BXD04 | 1.549 | 1.075 |
| BXD05 | 1.91 | 1.515 |
| BXD06 | 1.378 | 0.742 |
| BXD07 | 1.851 | 1.6 |
| BXD08 | 1.11 | 1.268 |
| BXD09 | 1.744 | 1.494 |
| CAST | -0.284 | 0.1 |
| CCcont | 1.322 | 1.612 |
| DS01 | 0.219 | -0.277 |
| DS02 | 0.277 | -2.059 |
| DS04 | 0.28 | -0.485 |
| DS0c | 0.082 | -0.872 |
| GP01 | -0.079 | 1.026 |
| GP02 | 1.205 | 1.277 |
| GP0c | 0.694 | 1.216 |
| NOD | 1.009 | 2.039 |
| NZO | -0.525 | -1.582 |
| PWK | -1.138 | -1.294 |
| H37Rv_KO_CtpC | 1.129 | 1.687 |
| H37Rv_KO_CtpD | 2.225 | 0.874 |
| H37Rv_KO_Rv1272 | 0.296 | 1.052 |
| H37Rv_KO_SugABC | 0.159 | 0.637 |
| H37Rv_KO_MbtN | -0.22 | -0.071 |
| Trans05 | 0.097 | 1.058 |
| macrophage_unactivated | 0.71 | 0.126 |
| IL1 | 0.86 | -0.249 |
| Rapamycin | 1.019 | 0.776 |
| Tcell | 0.248 | -0.033 |
| GMCSF | 0.158 | 0.576 |
| IFNab | 1.128 | 0.181 |
| IFNg | 0.115 | -0.056 |
| IFNg_GMCSF1 | 1.439 | -0.368 |
| Rv1432_day32 | 0.931 | -0.894 |
| Rv1565c_day32 | 0.035 | 0.515 |
| secA2_input | -0.233 | -0.094 |
| delta_Rv3594 | 0.537 | -0.561 |
| delta_Rv3717 | -0.866 | -1.451 |
| delta_Rv3811 | -0.235 | -1.28 |
| delta_Rv0954 | -0.544 | -1.194 |
| PonA1 | -0.922 | -2.221 |
| EccD1_KO | 0.533 | 0.918 |
| EspI_KO | 0.639 | 1.098 |
| PE35_KO | 0.359 | 0.715 |
| PPE68_KO | 0.266 | 0.854 |
| glycerol2 | -0.319 | -0.158 |
| lignocerate | 0.222 | -0.312 |
| oleate | -0.323 | -1.089 |
| phosphatidylcholine | 0.088 | -0.048 |
| acetate | 0.53 | -0.494 |
| glucAc | 0.233 | -0.694 |
| Rv0950ko | -1.101 | -0.407 |
| Rv1096ko | -1.143 | -1.36 |
| Rv3684ko | -0.789 | 0.105 |
| delta_otsA_trehalose | -0.826 | -1.24 |