Top 10 genes with highest correlation to Rv3165c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2740/ephG | (cc=0.4995) | info on Rv2740/ephG |
| Rv0769/- | (cc=0.4668) | info on Rv0769/- |
| Rv0499/- | (cc=0.4548) | info on Rv0499/- |
| Rv1499/- | (cc=0.4524) | info on Rv1499/- |
| Rv2308/- | (cc=0.4365) | info on Rv2308/- |
| Rv2060/- | (cc=0.4245) | info on Rv2060/- |
| Rv1219c/- | (cc=0.4109) | info on Rv1219c/- |
| Rv3553/- | (cc=0.4092) | info on Rv3553/- |
| Rv1082/mca | (cc=0.4085) | info on Rv1082/mca |
| Rv2437/- | (cc=0.4063) | info on Rv2437/- |
Correlation of Rv3165c/- with Rv3553/-
Normalized LFCs for Rv3165c/-:
(description and provenance of datasets)
| Rv3165c/- | Rv3553/- | |
| Fe_supp_jason_reseq | 1.427 | -0.346 |
| low_pH_jason_reseq | 0.151 | -0.798 |
| NO_jason_reseq | -1.394 | -1.685 |
| B6_jason_reseq | 0.333 | -2.718 |
| MHCII_jason_reseq | 0.308 | -2.764 |
| Isoniazid02 | -0.295 | 0.141 |
| Rifampicin4 | -0.309 | 0.054 |
| Ethambutol3 | -0.652 | -0.113 |
| Meropenem3 | 0.024 | 1.961 |
| Vancomycin16 | 0.027 | 0.08 |
| Rv2680_day32 | 2.941 | -0.074 |
| H37Rv_KO_MarP | 0.684 | 0.487 |
| hypoxia_3wks | -0.327 | -0.845 |
| hypoxia_6wks | -0.503 | 0.311 |
| glycerol | 0.718 | -0.36 |
| cholesterol | -0.506 | -3.515 |
| AJ | 0.128 | -2.393 |
| Bibs02 | -0.603 | -4.437 |
| Bibs02c | -1.291 | -3.674 |
| BL6 | -0.342 | -1.398 |
| BL6a | 0.161 | -2.752 |
| BXD01 | 0.173 | -1.241 |
| BXD010 | 1.189 | -1.394 |
| BXD011 | 0.478 | -0.52 |
| BXD03 | 0.706 | 0.554 |
| BXD04 | 0.913 | -1.209 |
| BXD05 | -0.249 | -0.145 |
| BXD06 | 0.829 | -1.453 |
| BXD07 | 0.687 | -0.464 |
| BXD08 | 0.143 | -0.937 |
| BXD09 | 0.486 | -1.953 |
| CAST | 0.305 | -3.482 |
| CCcont | 0.661 | 0.355 |
| DS01 | -0.32 | -3.472 |
| DS02 | -2.757 | -4.682 |
| DS04 | -1.577 | -3.407 |
| DS0c | -0.715 | -5.264 |
| GP01 | -0.715 | -0.565 |
| GP02 | -1.448 | -1.861 |
| GP0c | -0.98 | 0.139 |
| NOD | -0.199 | -2.511 |
| NZO | 0.564 | 0.1 |
| PWK | 0.159 | -1.77 |
| H37Rv_KO_CtpC | -0.567 | -3.144 |
| H37Rv_KO_CtpD | 1.921 | -1.494 |
| H37Rv_KO_Rv1272 | -0.082 | -0.089 |
| H37Rv_KO_SugABC | -0.562 | -0.01 |
| H37Rv_KO_MbtN | 0.877 | -0.159 |
| Trans05 | 1.323 | 0.536 |
| macrophage_unactivated | 1.266 | 0.0 |
| IL1 | 1.023 | 0.317 |
| Rapamycin | 0.657 | 0.485 |
| Tcell | 0.896 | -2.225 |
| GMCSF | 1.766 | 0.694 |
| IFNab | 0.686 | 1.246 |
| IFNg | 1.406 | 0.203 |
| IFNg_GMCSF1 | 0.0 | 0.17 |
| Rv1432_day32 | -1.042 | -0.926 |
| Rv1565c_day32 | 1.567 | -1.589 |
| secA2_input | 0.18 | -0.471 |
| delta_Rv3594 | -0.529 | 0.318 |
| delta_Rv3717 | -0.062 | 0.539 |
| delta_Rv3811 | 0.568 | 1.096 |
| delta_Rv0954 | -1.112 | 0.451 |
| PonA1 | -1.602 | -0.04 |
| EccD1_KO | 0.414 | 0.214 |
| EspI_KO | 1.198 | -0.57 |
| PE35_KO | 0.84 | 0.0 |
| PPE68_KO | 0.771 | -0.262 |
| glycerol2 | 0.717 | -0.238 |
| lignocerate | 1.492 | 0.817 |
| oleate | -3.549 | -2.912 |
| phosphatidylcholine | 0.378 | -0.038 |
| acetate | 1.197 | 0.517 |
| glucAc | 1.646 | 0.827 |
| Rv0950ko | 0.265 | 0.525 |
| Rv1096ko | 0.09 | 1.629 |
| Rv3684ko | -0.049 | 2.024 |
| delta_otsA_trehalose | 0.111 | -0.603 |