Top 10 genes with highest correlation to Rv3162c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0968/- | (cc=0.5573) | info on Rv0968/- |
Rv3566c/nat | (cc=0.5406) | info on Rv3566c/nat |
Rv2313c/- | (cc=0.5117) | info on Rv2313c/- |
Rv2066/cobI | (cc=0.51) | info on Rv2066/cobI |
Rv2322c/rocD1 | (cc=0.5047) | info on Rv2322c/rocD1 |
Rv1997/ctpF | (cc=0.4969) | info on Rv1997/ctpF |
Rv0342/iniA | (cc=0.4851) | info on Rv0342/iniA |
Rv0925c/- | (cc=0.4821) | info on Rv0925c/- |
Rv3191c/- | (cc=0.4711) | info on Rv3191c/- |
Rv3233c/- | (cc=0.4645) | info on Rv3233c/- |
Correlation of Rv3162c/- with Rv3191c/-
Normalized LFCs for Rv3162c/-:
(description and provenance of datasets)
Rv3162c/- | Rv3191c/- | |
Fe_supp_jason_reseq | -0.226 | -0.024 |
low_pH_jason_reseq | -0.803 | -0.37 |
NO_jason_reseq | -0.971 | -0.06 |
B6_jason_reseq | -0.461 | 0.47 |
MHCII_jason_reseq | 0.937 | 0.448 |
Isoniazid02 | -3.406 | -1.929 |
Rifampicin4 | 0.26 | 0.625 |
Ethambutol3 | -2.873 | -2.151 |
Meropenem3 | -1.185 | -0.361 |
Vancomycin16 | -1.271 | -0.907 |
Rv2680_day32 | 1.982 | 0.071 |
H37Rv_KO_MarP | 0.882 | 0.409 |
hypoxia_3wks | -1.116 | -0.395 |
hypoxia_6wks | -2.318 | -0.683 |
glycerol | -0.252 | -0.176 |
cholesterol | -0.131 | -0.111 |
AJ | 0.215 | 0.424 |
Bibs02 | -0.906 | 0.283 |
Bibs02c | 0.491 | 0.57 |
BL6 | -1.419 | -0.065 |
BL6a | -0.96 | 0.716 |
BXD01 | -1.792 | -0.167 |
BXD010 | -2.305 | 0.178 |
BXD011 | -0.726 | 0.436 |
BXD03 | -1.018 | 0.247 |
BXD04 | -1.594 | 0.221 |
BXD05 | -2.741 | 0.692 |
BXD06 | -1.288 | 0.452 |
BXD07 | -0.841 | 0.158 |
BXD08 | -0.799 | 0.253 |
BXD09 | -0.999 | 0.623 |
CAST | -0.132 | 0.439 |
CCcont | -1.124 | 0.151 |
DS01 | -0.25 | 0.862 |
DS02 | 0.153 | 0.285 |
DS04 | -0.571 | 1.062 |
DS0c | -0.212 | 0.292 |
GP01 | -0.987 | 0.304 |
GP02 | -0.733 | -0.484 |
GP0c | -1.739 | -0.684 |
NOD | 0.085 | 0.539 |
NZO | -0.689 | 0.585 |
PWK | -0.041 | 0.624 |
H37Rv_KO_CtpC | -0.348 | 0.291 |
H37Rv_KO_CtpD | -0.883 | 0.08 |
H37Rv_KO_Rv1272 | 0.812 | 0.547 |
H37Rv_KO_SugABC | 0.424 | 0.526 |
H37Rv_KO_MbtN | -1.021 | 0.429 |
Trans05 | 0.424 | 0.094 |
macrophage_unactivated | -0.442 | -0.174 |
IL1 | 0.475 | -0.047 |
Rapamycin | -1.139 | -0.169 |
Tcell | -0.544 | -0.606 |
GMCSF | -0.37 | 0.013 |
IFNab | 0.0 | 0.287 |
IFNg | -0.233 | 0.102 |
IFNg_GMCSF1 | 1.109 | 0.33 |
Rv1432_day32 | 0.177 | 0.316 |
Rv1565c_day32 | 0.0 | -0.591 |
secA2_input | -0.335 | -0.632 |
delta_Rv3594 | -1.36 | -0.08 |
delta_Rv3717 | -0.943 | -0.216 |
delta_Rv3811 | -1.039 | 0.025 |
delta_Rv0954 | -2.12 | -0.26 |
PonA1 | 0.204 | 0.123 |
EccD1_KO | 0.217 | -0.217 |
EspI_KO | -0.707 | 0.371 |
PE35_KO | 0.263 | 0.082 |
PPE68_KO | -0.666 | -0.189 |
glycerol2 | -0.455 | -0.113 |
lignocerate | 0.388 | 0.516 |
oleate | -1.326 | -0.413 |
phosphatidylcholine | -0.115 | 0.084 |
acetate | -0.407 | 0.57 |
glucAc | -0.013 | 0.485 |
Rv0950ko | 0.992 | 0.109 |
Rv1096ko | -0.739 | 0.38 |
Rv3684ko | 1.307 | 0.301 |
delta_otsA_trehalose | 0.445 | -0.138 |