Top 10 genes with highest correlation to Rv3162c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0968/- | (cc=0.5573) | info on Rv0968/- |
| Rv3566c/nat | (cc=0.5406) | info on Rv3566c/nat |
| Rv2313c/- | (cc=0.5117) | info on Rv2313c/- |
| Rv2066/cobI | (cc=0.51) | info on Rv2066/cobI |
| Rv2322c/rocD1 | (cc=0.5047) | info on Rv2322c/rocD1 |
| Rv1997/ctpF | (cc=0.4969) | info on Rv1997/ctpF |
| Rv0342/iniA | (cc=0.4851) | info on Rv0342/iniA |
| Rv0925c/- | (cc=0.4821) | info on Rv0925c/- |
| Rv3191c/- | (cc=0.4711) | info on Rv3191c/- |
| Rv3233c/- | (cc=0.4645) | info on Rv3233c/- |
Correlation of Rv3162c/- with Rv0342/iniA
Normalized LFCs for Rv3162c/-:
(description and provenance of datasets)
| Rv3162c/- | Rv0342/iniA | |
| Fe_supp_jason_reseq | -0.226 | -0.583 |
| low_pH_jason_reseq | -0.803 | -0.781 |
| NO_jason_reseq | -0.971 | 0.795 |
| B6_jason_reseq | -0.461 | 0.252 |
| MHCII_jason_reseq | 0.937 | 0.5 |
| Isoniazid02 | -3.406 | -2.219 |
| Rifampicin4 | 0.26 | 0.33 |
| Ethambutol3 | -2.873 | -2.382 |
| Meropenem3 | -1.185 | -1.242 |
| Vancomycin16 | -1.271 | -0.7 |
| Rv2680_day32 | 1.982 | -0.18 |
| H37Rv_KO_MarP | 0.882 | 0.368 |
| hypoxia_3wks | -1.116 | -0.112 |
| hypoxia_6wks | -2.318 | -0.535 |
| glycerol | -0.252 | 0.532 |
| cholesterol | -0.131 | 0.446 |
| AJ | 0.215 | 0.765 |
| Bibs02 | -0.906 | 0.009 |
| Bibs02c | 0.491 | -0.656 |
| BL6 | -1.419 | -0.238 |
| BL6a | -0.96 | -0.331 |
| BXD01 | -1.792 | -0.119 |
| BXD010 | -2.305 | -0.076 |
| BXD011 | -0.726 | 0.106 |
| BXD03 | -1.018 | 0.207 |
| BXD04 | -1.594 | 0.058 |
| BXD05 | -2.741 | 0.414 |
| BXD06 | -1.288 | 0.387 |
| BXD07 | -0.841 | -0.097 |
| BXD08 | -0.799 | 0.05 |
| BXD09 | -0.999 | -0.062 |
| CAST | -0.132 | 0.322 |
| CCcont | -1.124 | -0.276 |
| DS01 | -0.25 | -0.477 |
| DS02 | 0.153 | 0.221 |
| DS04 | -0.571 | -0.646 |
| DS0c | -0.212 | 0.489 |
| GP01 | -0.987 | 0.527 |
| GP02 | -0.733 | 0.28 |
| GP0c | -1.739 | 0.068 |
| NOD | 0.085 | 0.042 |
| NZO | -0.689 | 0.549 |
| PWK | -0.041 | 0.517 |
| H37Rv_KO_CtpC | -0.348 | 0.207 |
| H37Rv_KO_CtpD | -0.883 | -0.05 |
| H37Rv_KO_Rv1272 | 0.812 | 0.588 |
| H37Rv_KO_SugABC | 0.424 | 0.512 |
| H37Rv_KO_MbtN | -1.021 | 0.24 |
| Trans05 | 0.424 | 0.793 |
| macrophage_unactivated | -0.442 | -0.429 |
| IL1 | 0.475 | -0.35 |
| Rapamycin | -1.139 | 0.147 |
| Tcell | -0.544 | -0.081 |
| GMCSF | -0.37 | -0.312 |
| IFNab | 0.0 | 0.239 |
| IFNg | -0.233 | -0.155 |
| IFNg_GMCSF1 | 1.109 | 0.176 |
| Rv1432_day32 | 0.177 | 0.186 |
| Rv1565c_day32 | 0.0 | 0.39 |
| secA2_input | -0.335 | 0.564 |
| delta_Rv3594 | -1.36 | -0.509 |
| delta_Rv3717 | -0.943 | -0.352 |
| delta_Rv3811 | -1.039 | -0.495 |
| delta_Rv0954 | -2.12 | -0.351 |
| PonA1 | 0.204 | -0.163 |
| EccD1_KO | 0.217 | 0.023 |
| EspI_KO | -0.707 | -0.522 |
| PE35_KO | 0.263 | -0.292 |
| PPE68_KO | -0.666 | -0.659 |
| glycerol2 | -0.455 | 0.423 |
| lignocerate | 0.388 | 0.66 |
| oleate | -1.326 | 0.461 |
| phosphatidylcholine | -0.115 | 0.391 |
| acetate | -0.407 | 0.632 |
| glucAc | -0.013 | 0.381 |
| Rv0950ko | 0.992 | 0.286 |
| Rv1096ko | -0.739 | 0.531 |
| Rv3684ko | 1.307 | 0.311 |
| delta_otsA_trehalose | 0.445 | 1.165 |