Top 10 genes with highest correlation to Rv3152/nuoH:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3150/nuoF | (cc=0.8676) | info on Rv3150/nuoF |
| Rv3153/nuoI | (cc=0.8379) | info on Rv3153/nuoI |
| Rv3145/nuoA | (cc=0.8061) | info on Rv3145/nuoA |
| Rv3148/nuoD | (cc=0.8015) | info on Rv3148/nuoD |
| Rv3151/nuoG | (cc=0.798) | info on Rv3151/nuoG |
| Rv3158/nuoN | (cc=0.7943) | info on Rv3158/nuoN |
| Rv3146/nuoB | (cc=0.7942) | info on Rv3146/nuoB |
| Rv3156/nuoL | (cc=0.778) | info on Rv3156/nuoL |
| Rv3143/- | (cc=0.74) | info on Rv3143/- |
| Rv1059/- | (cc=0.7303) | info on Rv1059/- |
Correlation of Rv3152/nuoH with Rv3158/nuoN
Normalized LFCs for Rv3152/nuoH:
(description and provenance of datasets)
| Rv3152/nuoH | Rv3158/nuoN | |
| Fe_supp_jason_reseq | -0.772 | 0.182 |
| low_pH_jason_reseq | -0.092 | -1.673 |
| NO_jason_reseq | -0.144 | -1.089 |
| B6_jason_reseq | -0.801 | -0.276 |
| MHCII_jason_reseq | -2.143 | -0.71 |
| Isoniazid02 | 0.444 | -0.195 |
| Rifampicin4 | 0.774 | 0.831 |
| Ethambutol3 | 0.069 | 1.696 |
| Meropenem3 | -0.659 | 0.228 |
| Vancomycin16 | -0.225 | 0.578 |
| Rv2680_day32 | -0.082 | 0.178 |
| H37Rv_KO_MarP | -0.697 | -0.734 |
| hypoxia_3wks | 1.009 | 0.0 |
| hypoxia_6wks | 0.979 | -0.092 |
| glycerol | -0.992 | -0.335 |
| cholesterol | -0.54 | -0.207 |
| AJ | 0.232 | -0.713 |
| Bibs02 | 1.123 | 0.31 |
| Bibs02c | 1.375 | 0.547 |
| BL6 | 2.337 | 1.457 |
| BL6a | 2.946 | 1.745 |
| BXD01 | 2.231 | 1.758 |
| BXD010 | 2.447 | 1.15 |
| BXD011 | 2.768 | 1.387 |
| BXD03 | 2.634 | 1.585 |
| BXD04 | 2.663 | 2.025 |
| BXD05 | 2.747 | 1.625 |
| BXD06 | 2.529 | 1.683 |
| BXD07 | 2.629 | 1.618 |
| BXD08 | 2.704 | 1.957 |
| BXD09 | 2.869 | 1.776 |
| CAST | 0.117 | -0.329 |
| CCcont | 1.606 | 1.104 |
| DS01 | 1.16 | 1.064 |
| DS02 | 1.367 | 1.024 |
| DS04 | 1.528 | 1.095 |
| DS0c | 1.838 | 1.68 |
| GP01 | 0.29 | 0.83 |
| GP02 | 0.696 | 0.429 |
| GP0c | 1.218 | 0.852 |
| NOD | -0.06 | -0.321 |
| NZO | 0.465 | -0.698 |
| PWK | -0.659 | -0.602 |
| H37Rv_KO_CtpC | 1.156 | 0.561 |
| H37Rv_KO_CtpD | 2.183 | 1.071 |
| H37Rv_KO_Rv1272 | 2.115 | 1.788 |
| H37Rv_KO_SugABC | 2.463 | 1.714 |
| H37Rv_KO_MbtN | 1.452 | 1.169 |
| Trans05 | 2.198 | 1.824 |
| macrophage_unactivated | -0.205 | -0.044 |
| IL1 | -0.641 | -0.172 |
| Rapamycin | -0.381 | -0.341 |
| Tcell | 0.261 | 0.424 |
| GMCSF | 0.256 | -0.214 |
| IFNab | 0.472 | 0.547 |
| IFNg | 0.024 | -0.278 |
| IFNg_GMCSF1 | -0.295 | -0.022 |
| Rv1432_day32 | -0.481 | 0.27 |
| Rv1565c_day32 | 1.035 | -0.796 |
| secA2_input | -0.382 | -0.722 |
| delta_Rv3594 | 0.361 | 0.416 |
| delta_Rv3717 | 0.695 | 0.194 |
| delta_Rv3811 | 0.25 | 0.404 |
| delta_Rv0954 | 0.695 | 0.541 |
| PonA1 | 0.254 | 0.314 |
| EccD1_KO | -0.125 | 0.293 |
| EspI_KO | 0.106 | 0.191 |
| PE35_KO | 0.0 | 0.368 |
| PPE68_KO | 0.643 | 0.634 |
| glycerol2 | 1.645 | 2.102 |
| lignocerate | -0.104 | -0.871 |
| oleate | 1.388 | 2.4 |
| phosphatidylcholine | -0.38 | -0.623 |
| acetate | 0.707 | 0.0 |
| glucAc | 1.157 | 0.605 |
| Rv0950ko | -0.217 | 0.669 |
| Rv1096ko | 0.461 | -0.166 |
| Rv3684ko | -0.344 | -0.121 |
| delta_otsA_trehalose | 0.69 | 0.7 |