Top 10 genes with highest correlation to Rv3146/nuoB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3150/nuoF | (cc=0.8695) | info on Rv3150/nuoF |
| Rv3152/nuoH | (cc=0.7942) | info on Rv3152/nuoH |
| Rv3153/nuoI | (cc=0.7824) | info on Rv3153/nuoI |
| Rv3148/nuoD | (cc=0.7804) | info on Rv3148/nuoD |
| Rv3149/nuoE | (cc=0.7667) | info on Rv3149/nuoE |
| Rv3158/nuoN | (cc=0.7594) | info on Rv3158/nuoN |
| Rv3151/nuoG | (cc=0.7388) | info on Rv3151/nuoG |
| Rv3145/nuoA | (cc=0.732) | info on Rv3145/nuoA |
| Rv3156/nuoL | (cc=0.7009) | info on Rv3156/nuoL |
| Rv3125c/PPE49 | (cc=0.6693) | info on Rv3125c/PPE49 |
Correlation of Rv3146/nuoB with Rv3156/nuoL
Normalized LFCs for Rv3146/nuoB:
(description and provenance of datasets)
| Rv3146/nuoB | Rv3156/nuoL | |
| Fe_supp_jason_reseq | -1.318 | -0.41 |
| low_pH_jason_reseq | -0.895 | -1.186 |
| NO_jason_reseq | -0.63 | 0.0 |
| B6_jason_reseq | -2.02 | -0.787 |
| MHCII_jason_reseq | -2.204 | -0.544 |
| Isoniazid02 | -0.303 | -1.825 |
| Rifampicin4 | 0.533 | 1.021 |
| Ethambutol3 | 1.094 | -0.621 |
| Meropenem3 | -0.944 | -0.673 |
| Vancomycin16 | 0.0 | -0.223 |
| Rv2680_day32 | 2.143 | -0.524 |
| H37Rv_KO_MarP | -0.08 | -0.387 |
| hypoxia_3wks | 1.228 | 1.3 |
| hypoxia_6wks | 0.528 | 0.205 |
| glycerol | 0.669 | -0.234 |
| cholesterol | 0.246 | -0.898 |
| AJ | -0.913 | -0.269 |
| Bibs02 | -2.215 | 0.873 |
| Bibs02c | -0.887 | 1.105 |
| BL6 | 2.686 | 1.47 |
| BL6a | 3.008 | 1.808 |
| BXD01 | 3.298 | 1.047 |
| BXD010 | 3.288 | 1.308 |
| BXD011 | 2.568 | 1.707 |
| BXD03 | 2.99 | 1.502 |
| BXD04 | 2.919 | 0.693 |
| BXD05 | 3.2 | 1.772 |
| BXD06 | 2.98 | 1.533 |
| BXD07 | 3.309 | 1.371 |
| BXD08 | 3.323 | 1.052 |
| BXD09 | 3.314 | 1.346 |
| CAST | 0.829 | 0.123 |
| CCcont | 1.842 | 0.861 |
| DS01 | -0.202 | 1.169 |
| DS02 | -0.285 | 1.453 |
| DS04 | 0.727 | 1.703 |
| DS0c | 0.443 | 1.285 |
| GP01 | 1.199 | 1.605 |
| GP02 | 0.444 | 1.171 |
| GP0c | 2.314 | 1.551 |
| NOD | 0.381 | 0.867 |
| NZO | 0.118 | -0.055 |
| PWK | 0.155 | -0.29 |
| H37Rv_KO_CtpC | 2.112 | 1.177 |
| H37Rv_KO_CtpD | 3.386 | 2.074 |
| H37Rv_KO_Rv1272 | 2.5 | 1.498 |
| H37Rv_KO_SugABC | 2.905 | 2.384 |
| H37Rv_KO_MbtN | 3.496 | 0.829 |
| Trans05 | 1.803 | 1.208 |
| macrophage_unactivated | -0.196 | -0.316 |
| IL1 | -0.32 | 0.0 |
| Rapamycin | -0.454 | -0.15 |
| Tcell | -0.202 | -0.267 |
| GMCSF | -0.536 | -0.309 |
| IFNab | 1.288 | 0.097 |
| IFNg | -0.016 | 0.126 |
| IFNg_GMCSF1 | -0.487 | -0.314 |
| Rv1432_day32 | -0.314 | 0.134 |
| Rv1565c_day32 | -0.058 | -0.038 |
| secA2_input | -1.083 | -0.565 |
| delta_Rv3594 | 0.268 | 0.087 |
| delta_Rv3717 | 0.409 | 0.269 |
| delta_Rv3811 | -0.44 | -0.149 |
| delta_Rv0954 | 0.735 | 0.211 |
| PonA1 | 0.202 | 0.044 |
| EccD1_KO | -0.783 | -1.02 |
| EspI_KO | 0.137 | -0.884 |
| PE35_KO | 0.0 | -0.33 |
| PPE68_KO | 0.301 | -0.118 |
| glycerol2 | 2.655 | 1.914 |
| lignocerate | -0.298 | -0.852 |
| oleate | 3.194 | 2.375 |
| phosphatidylcholine | -0.199 | -0.744 |
| acetate | 0.037 | 0.572 |
| glucAc | 0.62 | 0.163 |
| Rv0950ko | 1.236 | 0.422 |
| Rv1096ko | 1.318 | 0.636 |
| Rv3684ko | 0.491 | 0.537 |
| delta_otsA_trehalose | 0.503 | 1.21 |