Top 10 genes with highest correlation to Rv3134c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0042c/- | (cc=0.4637) | info on Rv0042c/- |
| Rv0472c/- | (cc=0.4616) | info on Rv0472c/- |
| Rv3428c/- | (cc=0.4586) | info on Rv3428c/- |
| Rv0821c/phoY2 | (cc=0.4373) | info on Rv0821c/phoY2 |
| Rv3301c/phoY1 | (cc=0.4182) | info on Rv3301c/phoY1 |
| Rv0825c/- | (cc=0.4136) | info on Rv0825c/- |
| Rv3816c/- | (cc=0.4134) | info on Rv3816c/- |
| Rv0739/- | (cc=0.4099) | info on Rv0739/- |
| Rv3667/acs | (cc=0.4087) | info on Rv3667/acs |
| Rv0871/cspB | (cc=0.4082) | info on Rv0871/cspB |
Correlation of Rv3134c/- with Rv3816c/-
Normalized LFCs for Rv3134c/-:
(description and provenance of datasets)
| Rv3134c/- | Rv3816c/- | |
| Fe_supp_jason_reseq | 0.0 | 0.051 |
| low_pH_jason_reseq | -0.492 | -0.246 |
| NO_jason_reseq | -0.063 | 0.575 |
| B6_jason_reseq | 0.733 | 0.323 |
| MHCII_jason_reseq | 1.14 | -1.741 |
| Isoniazid02 | 0.333 | -1.32 |
| Rifampicin4 | -0.03 | -0.133 |
| Ethambutol3 | 0.421 | -0.544 |
| Meropenem3 | -0.52 | 0.0 |
| Vancomycin16 | 0.042 | -0.546 |
| Rv2680_day32 | 0.543 | -1.446 |
| H37Rv_KO_MarP | -0.069 | -0.96 |
| hypoxia_3wks | -3.054 | -4.255 |
| hypoxia_6wks | -1.042 | -2.777 |
| glycerol | -0.633 | -2.926 |
| cholesterol | -0.469 | -2.413 |
| AJ | -0.146 | -1.837 |
| Bibs02 | 0.595 | 0.354 |
| Bibs02c | -0.308 | -0.82 |
| BL6 | 1.749 | 0.743 |
| BL6a | 0.159 | 0.636 |
| BXD01 | -0.13 | 0.833 |
| BXD010 | 0.373 | 1.307 |
| BXD011 | 0.597 | 2.479 |
| BXD03 | 0.772 | 0.957 |
| BXD04 | 0.13 | 0.441 |
| BXD05 | 0.86 | 1.263 |
| BXD06 | 0.154 | 1.518 |
| BXD07 | 0.811 | 0.743 |
| BXD08 | 0.465 | 1.625 |
| BXD09 | 0.256 | 1.494 |
| CAST | 0.711 | -0.547 |
| CCcont | 0.286 | -0.154 |
| DS01 | 0.009 | -2.525 |
| DS02 | 1.353 | -2.883 |
| DS04 | 0.32 | -1.827 |
| DS0c | 0.765 | -2.131 |
| GP01 | 0.315 | -0.97 |
| GP02 | -0.512 | -0.198 |
| GP0c | -0.01 | 0.369 |
| NOD | 0.304 | -0.775 |
| NZO | 0.052 | -1.724 |
| PWK | -1.276 | -0.386 |
| H37Rv_KO_CtpC | -0.945 | -1.231 |
| H37Rv_KO_CtpD | -0.852 | -0.301 |
| H37Rv_KO_Rv1272 | 0.005 | -1.272 |
| H37Rv_KO_SugABC | 0.799 | 0.257 |
| H37Rv_KO_MbtN | 1.522 | 1.059 |
| Trans05 | 0.369 | -1.588 |
| macrophage_unactivated | 0.473 | -1.253 |
| IL1 | 0.753 | 1.735 |
| Rapamycin | 0.448 | 1.737 |
| Tcell | -0.026 | -1.004 |
| GMCSF | 0.087 | -0.594 |
| IFNab | 1.264 | -0.305 |
| IFNg | -0.559 | 1.307 |
| IFNg_GMCSF1 | -0.013 | -0.606 |
| Rv1432_day32 | 2.211 | -0.705 |
| Rv1565c_day32 | 0.148 | -4.622 |
| secA2_input | 0.077 | 1.202 |
| delta_Rv3594 | 0.78 | 0.665 |
| delta_Rv3717 | 1.355 | 2.762 |
| delta_Rv3811 | 0.806 | 0.629 |
| delta_Rv0954 | 0.456 | -0.593 |
| PonA1 | 0.212 | -0.289 |
| EccD1_KO | -1.289 | -1.214 |
| EspI_KO | -0.83 | -2.185 |
| PE35_KO | -0.688 | -1.584 |
| PPE68_KO | -0.797 | -1.299 |
| glycerol2 | 0.586 | 0.95 |
| lignocerate | 1.436 | 0.0 |
| oleate | 0.492 | 0.0 |
| phosphatidylcholine | 0.919 | 0.0 |
| acetate | 0.695 | 0.806 |
| glucAc | 0.655 | 0.0 |
| Rv0950ko | -0.172 | -0.383 |
| Rv1096ko | 0.323 | -0.869 |
| Rv3684ko | -0.534 | -0.606 |
| delta_otsA_trehalose | -0.396 | -0.388 |