Top 10 genes with highest correlation to Rv3131/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1323/fadA4 | (cc=0.5549) | info on Rv1323/fadA4 |
| Rv1465/- | (cc=0.5495) | info on Rv1465/- |
| Rv2226/- | (cc=0.5469) | info on Rv2226/- |
| Rv0428c/- | (cc=0.5341) | info on Rv0428c/- |
| Rv2474c/- | (cc=0.5191) | info on Rv2474c/- |
| Rv0263c/- | (cc=0.4993) | info on Rv0263c/- |
| Rv0767c/- | (cc=0.4911) | info on Rv0767c/- |
| Rv3078/hab | (cc=0.4821) | info on Rv3078/hab |
| Rv0485/- | (cc=0.4778) | info on Rv0485/- |
| Rv3541c/- | (cc=0.469) | info on Rv3541c/- |
Correlation of Rv3131/- with Rv1323/fadA4
Normalized LFCs for Rv3131/-:
(description and provenance of datasets)
| Rv3131/- | Rv1323/fadA4 | |
| Fe_supp_jason_reseq | -2.147 | -0.66 |
| low_pH_jason_reseq | 0.032 | 0.457 |
| NO_jason_reseq | -4.744 | -1.097 |
| B6_jason_reseq | -1.049 | -0.71 |
| MHCII_jason_reseq | -0.196 | 0.604 |
| Isoniazid02 | 0.537 | 1.058 |
| Rifampicin4 | -0.165 | 0.425 |
| Ethambutol3 | 0.302 | 1.045 |
| Meropenem3 | 0.357 | 1.236 |
| Vancomycin16 | 1.708 | 0.982 |
| Rv2680_day32 | -0.947 | -0.734 |
| H37Rv_KO_MarP | 0.508 | 0.885 |
| hypoxia_3wks | 0.961 | -0.502 |
| hypoxia_6wks | -0.14 | -1.462 |
| glycerol | -1.2 | -0.047 |
| cholesterol | -0.018 | 0.055 |
| AJ | -1.709 | -0.376 |
| Bibs02 | -0.354 | -0.121 |
| Bibs02c | -0.221 | -0.02 |
| BL6 | -0.83 | -2.727 |
| BL6a | -1.511 | -1.342 |
| BXD01 | -2.241 | -2.864 |
| BXD010 | -2.705 | -2.137 |
| BXD011 | -1.4 | -3.063 |
| BXD03 | -1.142 | -2.196 |
| BXD04 | -1.905 | -2.652 |
| BXD05 | -2.15 | -2.511 |
| BXD06 | -1.853 | -2.77 |
| BXD07 | -1.472 | -2.721 |
| BXD08 | -2.688 | -3.027 |
| BXD09 | -2.019 | -2.917 |
| CAST | -2.294 | -0.868 |
| CCcont | -1.696 | -1.199 |
| DS01 | -2.062 | -0.592 |
| DS02 | -2.39 | -0.121 |
| DS04 | -2.516 | -1.566 |
| DS0c | 0.778 | -0.596 |
| GP01 | -1.324 | -1.94 |
| GP02 | -1.758 | -2.603 |
| GP0c | -2.237 | -3.04 |
| NOD | -2.166 | 0.628 |
| NZO | 0.0 | -1.753 |
| PWK | -0.47 | -0.521 |
| H37Rv_KO_CtpC | 0.415 | 0.172 |
| H37Rv_KO_CtpD | -1.82 | -0.962 |
| H37Rv_KO_Rv1272 | -2.173 | -2.119 |
| H37Rv_KO_SugABC | -2.002 | -0.711 |
| H37Rv_KO_MbtN | -0.814 | -1.156 |
| Trans05 | -2.532 | -1.482 |
| macrophage_unactivated | -2.358 | -1.496 |
| IL1 | 0.178 | -1.062 |
| Rapamycin | -1.182 | -1.495 |
| Tcell | -1.522 | -0.746 |
| GMCSF | -1.017 | -1.545 |
| IFNab | -0.387 | -1.433 |
| IFNg | -0.623 | -1.721 |
| IFNg_GMCSF1 | 0.0 | -0.377 |
| Rv1432_day32 | -1.695 | -0.724 |
| Rv1565c_day32 | -4.036 | 0.697 |
| secA2_input | 0.122 | 0.473 |
| delta_Rv3594 | 0.156 | 0.34 |
| delta_Rv3717 | 0.534 | -0.313 |
| delta_Rv3811 | 0.744 | 0.034 |
| delta_Rv0954 | 1.075 | 0.643 |
| PonA1 | -0.361 | 0.291 |
| EccD1_KO | 1.457 | 0.421 |
| EspI_KO | 1.021 | -0.051 |
| PE35_KO | 0.601 | 0.251 |
| PPE68_KO | 0.342 | 0.275 |
| glycerol2 | -0.581 | 0.586 |
| lignocerate | -0.505 | 1.196 |
| oleate | -0.274 | 0.303 |
| phosphatidylcholine | -0.176 | 0.847 |
| acetate | -0.826 | 0.74 |
| glucAc | -0.13 | 0.642 |
| Rv0950ko | -0.323 | 0.431 |
| Rv1096ko | 1.834 | 0.676 |
| Rv3684ko | 0.429 | 0.056 |
| delta_otsA_trehalose | -0.94 | -1.023 |