Top 10 genes with highest correlation to Rv3127/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0698/- | (cc=0.5544) | info on Rv0698/- |
| Rv1550/fadD11 | (cc=0.5154) | info on Rv1550/fadD11 |
| Rv2821c/- | (cc=0.5072) | info on Rv2821c/- |
| Rv3173c/- | (cc=0.4928) | info on Rv3173c/- |
| Rv3224B/- | (cc=0.4743) | info on Rv3224B/- |
| Rv1425/- | (cc=0.4654) | info on Rv1425/- |
| Rv2781c/- | (cc=0.4558) | info on Rv2781c/- |
| Rv2405/- | (cc=0.4531) | info on Rv2405/- |
| Rv1958c/- | (cc=0.4504) | info on Rv1958c/- |
| Rv3395A/- | (cc=0.4489) | info on Rv3395A/- |
Correlation of Rv3127/- with Rv2405/-
Normalized LFCs for Rv3127/-:
(description and provenance of datasets)
| Rv3127/- | Rv2405/- | |
| Fe_supp_jason_reseq | 0.524 | -0.863 |
| low_pH_jason_reseq | 0.555 | -0.249 |
| NO_jason_reseq | 0.767 | 1.289 |
| B6_jason_reseq | -0.517 | 0.026 |
| MHCII_jason_reseq | 0.203 | -0.023 |
| Isoniazid02 | -0.194 | 0.551 |
| Rifampicin4 | 0.485 | 1.259 |
| Ethambutol3 | 1.054 | 1.004 |
| Meropenem3 | 2.889 | 1.991 |
| Vancomycin16 | 0.573 | 0.915 |
| Rv2680_day32 | 0.383 | 0.978 |
| H37Rv_KO_MarP | 1.082 | 0.549 |
| hypoxia_3wks | -0.694 | -0.403 |
| hypoxia_6wks | 0.727 | -0.633 |
| glycerol | -1.009 | -0.013 |
| cholesterol | -0.338 | 0.824 |
| AJ | -0.424 | 0.556 |
| Bibs02 | -1.658 | -2.088 |
| Bibs02c | -0.908 | -0.146 |
| BL6 | 1.453 | 0.346 |
| BL6a | -1.201 | -0.636 |
| BXD01 | 0.552 | -0.97 |
| BXD010 | 0.678 | -1.103 |
| BXD011 | 0.575 | -0.769 |
| BXD03 | -0.149 | -1.365 |
| BXD04 | 0.214 | 0.613 |
| BXD05 | -0.423 | -0.845 |
| BXD06 | -0.277 | -0.805 |
| BXD07 | -0.287 | -1.193 |
| BXD08 | -0.177 | -0.972 |
| BXD09 | -0.656 | -1.346 |
| CAST | -0.791 | 0.439 |
| CCcont | 0.772 | -0.361 |
| DS01 | 0.722 | 0.383 |
| DS02 | 0.525 | 0.236 |
| DS04 | -0.169 | -0.163 |
| DS0c | 0.698 | 0.864 |
| GP01 | -0.801 | 0.541 |
| GP02 | 0.637 | 0.673 |
| GP0c | 0.721 | 1.023 |
| NOD | -0.195 | -0.109 |
| NZO | -0.173 | -0.604 |
| PWK | 0.232 | 0.897 |
| H37Rv_KO_CtpC | 0.192 | -0.923 |
| H37Rv_KO_CtpD | 0.387 | -0.052 |
| H37Rv_KO_Rv1272 | 1.464 | 0.092 |
| H37Rv_KO_SugABC | -0.529 | 0.166 |
| H37Rv_KO_MbtN | 0.621 | -0.66 |
| Trans05 | 1.161 | 0.077 |
| macrophage_unactivated | 0.776 | -0.543 |
| IL1 | -0.308 | -0.445 |
| Rapamycin | -0.666 | -0.46 |
| Tcell | 0.417 | -0.202 |
| GMCSF | -0.372 | -2.482 |
| IFNab | -0.209 | -0.593 |
| IFNg | -0.684 | -1.932 |
| IFNg_GMCSF1 | -0.933 | 0.308 |
| Rv1432_day32 | 0.939 | 1.116 |
| Rv1565c_day32 | 0.553 | 1.369 |
| secA2_input | -0.418 | 0.607 |
| delta_Rv3594 | -0.332 | 0.584 |
| delta_Rv3717 | -0.206 | -0.746 |
| delta_Rv3811 | 0.239 | 0.415 |
| delta_Rv0954 | -0.584 | 0.986 |
| PonA1 | -1.829 | 1.944 |
| EccD1_KO | -0.865 | -0.793 |
| EspI_KO | -0.53 | 0.533 |
| PE35_KO | -0.064 | -0.099 |
| PPE68_KO | 0.138 | -0.182 |
| glycerol2 | 1.545 | 2.888 |
| lignocerate | 2.115 | 3.535 |
| oleate | -0.614 | 0.251 |
| phosphatidylcholine | 1.437 | 2.711 |
| acetate | 1.278 | 2.898 |
| glucAc | 1.483 | 2.694 |
| Rv0950ko | -0.338 | 1.049 |
| Rv1096ko | -0.19 | 1.662 |
| Rv3684ko | -0.589 | 1.064 |
| delta_otsA_trehalose | 0.36 | -1.856 |