Top 10 genes with highest correlation to Rv3127/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0698/- | (cc=0.5544) | info on Rv0698/- |
| Rv1550/fadD11 | (cc=0.5154) | info on Rv1550/fadD11 |
| Rv2821c/- | (cc=0.5072) | info on Rv2821c/- |
| Rv3173c/- | (cc=0.4928) | info on Rv3173c/- |
| Rv3224B/- | (cc=0.4743) | info on Rv3224B/- |
| Rv1425/- | (cc=0.4654) | info on Rv1425/- |
| Rv2781c/- | (cc=0.4558) | info on Rv2781c/- |
| Rv2405/- | (cc=0.4531) | info on Rv2405/- |
| Rv1958c/- | (cc=0.4504) | info on Rv1958c/- |
| Rv3395A/- | (cc=0.4489) | info on Rv3395A/- |
Correlation of Rv3127/- with Rv1425/-
Normalized LFCs for Rv3127/-:
(description and provenance of datasets)
| Rv3127/- | Rv1425/- | |
| Fe_supp_jason_reseq | 0.524 | 0.054 |
| low_pH_jason_reseq | 0.555 | -0.119 |
| NO_jason_reseq | 0.767 | -0.168 |
| B6_jason_reseq | -0.517 | 0.634 |
| MHCII_jason_reseq | 0.203 | 0.73 |
| Isoniazid02 | -0.194 | 1.234 |
| Rifampicin4 | 0.485 | -0.087 |
| Ethambutol3 | 1.054 | 0.061 |
| Meropenem3 | 2.889 | 0.817 |
| Vancomycin16 | 0.573 | 0.085 |
| Rv2680_day32 | 0.383 | 0.043 |
| H37Rv_KO_MarP | 1.082 | 0.236 |
| hypoxia_3wks | -0.694 | -0.263 |
| hypoxia_6wks | 0.727 | -0.56 |
| glycerol | -1.009 | -0.591 |
| cholesterol | -0.338 | 0.012 |
| AJ | -0.424 | 0.123 |
| Bibs02 | -1.658 | -0.11 |
| Bibs02c | -0.908 | -0.27 |
| BL6 | 1.453 | -0.246 |
| BL6a | -1.201 | -0.775 |
| BXD01 | 0.552 | 0.297 |
| BXD010 | 0.678 | -0.432 |
| BXD011 | 0.575 | -0.176 |
| BXD03 | -0.149 | -0.488 |
| BXD04 | 0.214 | 0.021 |
| BXD05 | -0.423 | -0.328 |
| BXD06 | -0.277 | 0.039 |
| BXD07 | -0.287 | -0.152 |
| BXD08 | -0.177 | 0.163 |
| BXD09 | -0.656 | -0.395 |
| CAST | -0.791 | -0.489 |
| CCcont | 0.772 | -0.25 |
| DS01 | 0.722 | 0.05 |
| DS02 | 0.525 | 0.46 |
| DS04 | -0.169 | 0.416 |
| DS0c | 0.698 | 0.09 |
| GP01 | -0.801 | -0.038 |
| GP02 | 0.637 | 1.025 |
| GP0c | 0.721 | -0.199 |
| NOD | -0.195 | 0.163 |
| NZO | -0.173 | 0.295 |
| PWK | 0.232 | 0.276 |
| H37Rv_KO_CtpC | 0.192 | -0.328 |
| H37Rv_KO_CtpD | 0.387 | 0.169 |
| H37Rv_KO_Rv1272 | 1.464 | 0.747 |
| H37Rv_KO_SugABC | -0.529 | -0.2 |
| H37Rv_KO_MbtN | 0.621 | -0.224 |
| Trans05 | 1.161 | 0.532 |
| macrophage_unactivated | 0.776 | -0.107 |
| IL1 | -0.308 | -0.05 |
| Rapamycin | -0.666 | 0.276 |
| Tcell | 0.417 | -0.14 |
| GMCSF | -0.372 | 0.045 |
| IFNab | -0.209 | -0.348 |
| IFNg | -0.684 | -0.233 |
| IFNg_GMCSF1 | -0.933 | -0.135 |
| Rv1432_day32 | 0.939 | 0.0 |
| Rv1565c_day32 | 0.553 | 0.377 |
| secA2_input | -0.418 | -0.027 |
| delta_Rv3594 | -0.332 | -0.119 |
| delta_Rv3717 | -0.206 | -0.395 |
| delta_Rv3811 | 0.239 | -0.412 |
| delta_Rv0954 | -0.584 | 0.58 |
| PonA1 | -1.829 | -0.488 |
| EccD1_KO | -0.865 | -0.526 |
| EspI_KO | -0.53 | -0.753 |
| PE35_KO | -0.064 | -0.312 |
| PPE68_KO | 0.138 | -1.008 |
| glycerol2 | 1.545 | 0.996 |
| lignocerate | 2.115 | 1.223 |
| oleate | -0.614 | 0.896 |
| phosphatidylcholine | 1.437 | 1.389 |
| acetate | 1.278 | 0.68 |
| glucAc | 1.483 | 0.474 |
| Rv0950ko | -0.338 | -0.277 |
| Rv1096ko | -0.19 | -0.229 |
| Rv3684ko | -0.589 | -0.098 |
| delta_otsA_trehalose | 0.36 | -0.628 |