Top 10 genes with highest correlation to Rv3120/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2296/- | (cc=0.5317) | info on Rv2296/- |
| Rv2307D/- | (cc=0.53) | info on Rv2307D/- |
| Rv2652c/- | (cc=0.506) | info on Rv2652c/- |
| Rv3571/kshB | (cc=0.4919) | info on Rv3571/kshB |
| Rv0916c/PE7 | (cc=0.4913) | info on Rv0916c/PE7 |
| Rv1704c/cycA | (cc=0.4592) | info on Rv1704c/cycA |
| Rv2087/- | (cc=0.4568) | info on Rv2087/- |
| Rv3478/PPE60 | (cc=0.4502) | info on Rv3478/PPE60 |
| Rv1074c/fadA3 | (cc=0.4497) | info on Rv1074c/fadA3 |
| Rv0843/- | (cc=0.437) | info on Rv0843/- |
Correlation of Rv3120/- with Rv0916c/PE7
Normalized LFCs for Rv3120/-:
(description and provenance of datasets)
| Rv3120/- | Rv0916c/PE7 | |
| Fe_supp_jason_reseq | 0.35 | -0.388 |
| low_pH_jason_reseq | -0.885 | -0.231 |
| NO_jason_reseq | -0.772 | 0.357 |
| B6_jason_reseq | -0.851 | -1.096 |
| MHCII_jason_reseq | -0.628 | -1.966 |
| Isoniazid02 | -0.198 | -0.023 |
| Rifampicin4 | 0.311 | 0.747 |
| Ethambutol3 | 0.426 | 1.126 |
| Meropenem3 | -1.405 | 0.147 |
| Vancomycin16 | -0.361 | 0.626 |
| Rv2680_day32 | -0.914 | 0.0 |
| H37Rv_KO_MarP | -0.522 | 0.181 |
| hypoxia_3wks | -0.12 | 0.55 |
| hypoxia_6wks | -0.37 | -0.99 |
| glycerol | -1.673 | -2.782 |
| cholesterol | -1.347 | -2.164 |
| AJ | -0.417 | -0.709 |
| Bibs02 | -0.77 | -2.731 |
| Bibs02c | -0.591 | -1.958 |
| BL6 | -1.771 | 0.435 |
| BL6a | -0.917 | -1.24 |
| BXD01 | -0.495 | -0.45 |
| BXD010 | -1.015 | 0.404 |
| BXD011 | 0.365 | 0.904 |
| BXD03 | -0.117 | 1.019 |
| BXD04 | -1.218 | -1.349 |
| BXD05 | -0.611 | -0.493 |
| BXD06 | -0.487 | 0.019 |
| BXD07 | -0.086 | -0.628 |
| BXD08 | -0.571 | -0.433 |
| BXD09 | -0.725 | -0.702 |
| CAST | -0.384 | -0.445 |
| CCcont | -0.852 | -0.114 |
| DS01 | -0.147 | -0.375 |
| DS02 | -0.599 | -1.812 |
| DS04 | -0.534 | -1.321 |
| DS0c | -0.024 | 0.27 |
| GP01 | -0.546 | -1.077 |
| GP02 | 0.116 | 0.34 |
| GP0c | -0.569 | -1.314 |
| NOD | 1.172 | -0.171 |
| NZO | -0.397 | 0.968 |
| PWK | -0.641 | 0.597 |
| H37Rv_KO_CtpC | -0.324 | 1.304 |
| H37Rv_KO_CtpD | -0.349 | -0.412 |
| H37Rv_KO_Rv1272 | 0.75 | 0.041 |
| H37Rv_KO_SugABC | -0.99 | 1.18 |
| H37Rv_KO_MbtN | -0.306 | 1.584 |
| Trans05 | -0.235 | 1.003 |
| macrophage_unactivated | -0.647 | 0.085 |
| IL1 | -0.314 | -0.08 |
| Rapamycin | 0.374 | 1.037 |
| Tcell | -0.482 | 0.583 |
| GMCSF | -0.953 | 1.22 |
| IFNab | 0.405 | 0.082 |
| IFNg | 1.243 | 1.181 |
| IFNg_GMCSF1 | 0.157 | 0.924 |
| Rv1432_day32 | 0.568 | 0.0 |
| Rv1565c_day32 | 0.188 | 0.818 |
| secA2_input | -0.166 | -0.938 |
| delta_Rv3594 | 1.285 | 0.895 |
| delta_Rv3717 | -0.126 | 0.405 |
| delta_Rv3811 | -0.021 | 0.7 |
| delta_Rv0954 | -0.416 | 1.473 |
| PonA1 | 0.649 | -0.118 |
| EccD1_KO | 1.023 | 1.125 |
| EspI_KO | 0.978 | 3.434 |
| PE35_KO | 1.383 | 1.114 |
| PPE68_KO | 1.728 | 2.857 |
| glycerol2 | 0.338 | -0.031 |
| lignocerate | -0.136 | 0.105 |
| oleate | 0.812 | -0.537 |
| phosphatidylcholine | 0.266 | -0.063 |
| acetate | 0.484 | 0.178 |
| glucAc | 0.036 | 0.213 |
| Rv0950ko | -0.292 | 0.193 |
| Rv1096ko | -0.51 | -0.16 |
| Rv3684ko | -0.318 | -0.085 |
| delta_otsA_trehalose | -0.59 | 1.489 |