Top 10 genes with highest correlation to Rv3103c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2718c/nrdR | (cc=0.5474) | info on Rv2718c/nrdR |
| Rv3349c/- | (cc=0.5003) | info on Rv3349c/- |
| Rv0303/- | (cc=0.4749) | info on Rv0303/- |
| Rv0203/- | (cc=0.4516) | info on Rv0203/- |
| Rv0481c/- | (cc=0.4477) | info on Rv0481c/- |
| Rv2670c/- | (cc=0.4465) | info on Rv2670c/- |
| Rv1528c/papA4 | (cc=0.4399) | info on Rv1528c/papA4 |
| Rv1839c/vapB13 | (cc=0.4369) | info on Rv1839c/vapB13 |
| Rv1453/- | (cc=0.4345) | info on Rv1453/- |
| Rv0835/lpqQ | (cc=0.4321) | info on Rv0835/lpqQ |
Correlation of Rv3103c/- with Rv2718c/nrdR
Normalized LFCs for Rv3103c/-:
(description and provenance of datasets)
| Rv3103c/- | Rv2718c/nrdR | |
| Fe_supp_jason_reseq | 0.3 | 0.237 |
| low_pH_jason_reseq | 0.412 | 0.79 |
| NO_jason_reseq | 0.184 | -0.774 |
| B6_jason_reseq | 0.772 | 0.766 |
| MHCII_jason_reseq | 0.842 | 1.513 |
| Isoniazid02 | 0.566 | -0.501 |
| Rifampicin4 | -0.206 | -0.517 |
| Ethambutol3 | -0.3 | -0.214 |
| Meropenem3 | 0.962 | 2.119 |
| Vancomycin16 | -0.011 | -0.21 |
| Rv2680_day32 | -0.525 | 0.389 |
| H37Rv_KO_MarP | 0.188 | 0.841 |
| hypoxia_3wks | 1.025 | 0.167 |
| hypoxia_6wks | 0.848 | 1.1 |
| glycerol | -0.2 | 0.247 |
| cholesterol | 0.648 | 1.118 |
| AJ | -0.38 | 0.756 |
| Bibs02 | -0.142 | 1.085 |
| Bibs02c | 0.684 | 0.846 |
| BL6 | -0.799 | 0.188 |
| BL6a | 0.245 | 0.343 |
| BXD01 | -0.309 | -0.25 |
| BXD010 | -0.193 | 0.337 |
| BXD011 | 0.311 | 0.126 |
| BXD03 | 0.057 | -0.217 |
| BXD04 | -0.39 | 0.649 |
| BXD05 | -0.271 | 0.093 |
| BXD06 | -0.246 | -0.136 |
| BXD07 | -0.177 | -0.619 |
| BXD08 | -0.296 | -0.719 |
| BXD09 | -0.212 | -0.315 |
| CAST | 0.472 | 0.772 |
| CCcont | -1.069 | -0.334 |
| DS01 | 0.66 | 1.016 |
| DS02 | 0.367 | 0.898 |
| DS04 | 0.547 | 0.46 |
| DS0c | -0.025 | 1.007 |
| GP01 | -1.468 | -1.805 |
| GP02 | -2.064 | -1.73 |
| GP0c | -2.029 | 0.443 |
| NOD | 0.748 | 0.657 |
| NZO | 0.105 | 0.431 |
| PWK | -0.472 | 1.303 |
| H37Rv_KO_CtpC | -0.228 | -0.238 |
| H37Rv_KO_CtpD | 0.872 | 0.797 |
| H37Rv_KO_Rv1272 | 0.522 | 0.313 |
| H37Rv_KO_SugABC | -1.29 | 1.089 |
| H37Rv_KO_MbtN | 0.189 | -1.304 |
| Trans05 | 0.604 | 0.517 |
| macrophage_unactivated | -0.294 | -0.508 |
| IL1 | -0.498 | -0.288 |
| Rapamycin | -0.101 | 0.107 |
| Tcell | -0.955 | 0.225 |
| GMCSF | 0.879 | 0.855 |
| IFNab | -0.372 | -0.447 |
| IFNg | 0.043 | 0.5 |
| IFNg_GMCSF1 | -0.264 | 0.286 |
| Rv1432_day32 | 1.173 | 0.395 |
| Rv1565c_day32 | -1.554 | -1.259 |
| secA2_input | 1.59 | 0.441 |
| delta_Rv3594 | -0.476 | -0.471 |
| delta_Rv3717 | 0.299 | -0.979 |
| delta_Rv3811 | -0.486 | -0.691 |
| delta_Rv0954 | -0.41 | 0.563 |
| PonA1 | 0.478 | 0.31 |
| EccD1_KO | -0.562 | -1.098 |
| EspI_KO | 0.465 | -1.252 |
| PE35_KO | -0.438 | -0.242 |
| PPE68_KO | -1.014 | -0.784 |
| glycerol2 | -0.958 | -1.044 |
| lignocerate | -1.277 | -1.746 |
| oleate | -0.839 | -0.964 |
| phosphatidylcholine | -0.903 | -1.158 |
| acetate | -1.33 | -0.482 |
| glucAc | -1.291 | -0.576 |
| Rv0950ko | 0.476 | 0.694 |
| Rv1096ko | -0.024 | -0.22 |
| Rv3684ko | 0.485 | -0.21 |
| delta_otsA_trehalose | 0.437 | 0.965 |