Top 10 genes with highest correlation to Rv3091/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0330c/- | (cc=0.5366) | info on Rv0330c/- |
| Rv1736c/narX | (cc=0.52) | info on Rv1736c/narX |
| Rv2636/- | (cc=0.5037) | info on Rv2636/- |
| Rv2848c/cobB | (cc=0.4989) | info on Rv2848c/cobB |
| Rv2003c/- | (cc=0.4943) | info on Rv2003c/- |
| Rv0441c/- | (cc=0.4882) | info on Rv0441c/- |
| Rv3169/- | (cc=0.4839) | info on Rv3169/- |
| Rv1838c/vapC13 | (cc=0.4833) | info on Rv1838c/vapC13 |
| Rv2766c/- | (cc=0.4819) | info on Rv2766c/- |
| Rv1999c/- | (cc=0.4784) | info on Rv1999c/- |
Correlation of Rv3091/- with Rv2848c/cobB
Normalized LFCs for Rv3091/-:
(description and provenance of datasets)
| Rv3091/- | Rv2848c/cobB | |
| Fe_supp_jason_reseq | -1.219 | 0.66 |
| low_pH_jason_reseq | -0.467 | -0.212 |
| NO_jason_reseq | -0.047 | 0.071 |
| B6_jason_reseq | -0.054 | 0.274 |
| MHCII_jason_reseq | 0.665 | 0.558 |
| Isoniazid02 | 0.178 | 1.521 |
| Rifampicin4 | -0.406 | 0.72 |
| Ethambutol3 | 0.191 | 1.454 |
| Meropenem3 | -0.533 | 0.187 |
| Vancomycin16 | -0.08 | 0.706 |
| Rv2680_day32 | 0.061 | -0.633 |
| H37Rv_KO_MarP | 0.09 | -0.161 |
| hypoxia_3wks | -0.415 | 0.263 |
| hypoxia_6wks | -0.758 | -0.035 |
| glycerol | -0.116 | 0.426 |
| cholesterol | -0.216 | 0.385 |
| AJ | 0.402 | 0.521 |
| Bibs02 | 0.159 | 0.534 |
| Bibs02c | 0.38 | 0.303 |
| BL6 | -0.504 | 0.39 |
| BL6a | -0.623 | -0.034 |
| BXD01 | -0.765 | -0.805 |
| BXD010 | -0.516 | -1.385 |
| BXD011 | -0.615 | -0.787 |
| BXD03 | -0.608 | -0.372 |
| BXD04 | -0.355 | -0.708 |
| BXD05 | -0.711 | -0.832 |
| BXD06 | -0.744 | -0.705 |
| BXD07 | -0.796 | -1.089 |
| BXD08 | -0.096 | -0.251 |
| BXD09 | -0.552 | -1.055 |
| CAST | -0.527 | 0.02 |
| CCcont | -0.771 | -0.497 |
| DS01 | 0.183 | 0.58 |
| DS02 | 0.377 | 0.799 |
| DS04 | 0.512 | 0.748 |
| DS0c | -0.534 | 0.487 |
| GP01 | 0.566 | -0.741 |
| GP02 | -0.02 | -0.257 |
| GP0c | 0.105 | -0.167 |
| NOD | -0.291 | -0.334 |
| NZO | -0.627 | 0.212 |
| PWK | -0.112 | 0.342 |
| H37Rv_KO_CtpC | -1.014 | -0.324 |
| H37Rv_KO_CtpD | -0.557 | -0.067 |
| H37Rv_KO_Rv1272 | -0.129 | -0.372 |
| H37Rv_KO_SugABC | -0.57 | -1.675 |
| H37Rv_KO_MbtN | -1.173 | -1.399 |
| Trans05 | 0.226 | -0.419 |
| macrophage_unactivated | -0.581 | 2.071 |
| IL1 | 0.433 | 2.948 |
| Rapamycin | 0.792 | 2.627 |
| Tcell | -0.482 | -4.822 |
| GMCSF | 0.417 | 2.986 |
| IFNab | 0.408 | 3.223 |
| IFNg | 0.588 | 2.881 |
| IFNg_GMCSF1 | 0.273 | 4.342 |
| Rv1432_day32 | -0.009 | -0.257 |
| Rv1565c_day32 | 0.6 | 0.134 |
| secA2_input | 0.341 | 1.061 |
| delta_Rv3594 | -0.089 | -0.199 |
| delta_Rv3717 | -0.04 | -0.273 |
| delta_Rv3811 | -0.793 | -1.05 |
| delta_Rv0954 | -0.509 | -0.696 |
| PonA1 | -0.418 | 0.17 |
| EccD1_KO | 0.056 | -0.122 |
| EspI_KO | 0.214 | 0.103 |
| PE35_KO | 0.265 | 0.863 |
| PPE68_KO | 0.467 | 0.39 |
| glycerol2 | 0.07 | 0.475 |
| lignocerate | 0.329 | 0.66 |
| oleate | -0.013 | 0.2 |
| phosphatidylcholine | 0.427 | 0.675 |
| acetate | -0.071 | 1.714 |
| glucAc | -0.09 | 0.59 |
| Rv0950ko | 0.127 | -0.199 |
| Rv1096ko | 0.666 | 0.507 |
| Rv3684ko | 0.0 | -1.068 |
| delta_otsA_trehalose | 0.276 | 0.322 |