Top 10 genes with highest correlation to Rv3091/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0330c/- | (cc=0.5366) | info on Rv0330c/- |
| Rv1736c/narX | (cc=0.52) | info on Rv1736c/narX |
| Rv2636/- | (cc=0.5037) | info on Rv2636/- |
| Rv2848c/cobB | (cc=0.4989) | info on Rv2848c/cobB |
| Rv2003c/- | (cc=0.4943) | info on Rv2003c/- |
| Rv0441c/- | (cc=0.4882) | info on Rv0441c/- |
| Rv3169/- | (cc=0.4839) | info on Rv3169/- |
| Rv1838c/vapC13 | (cc=0.4833) | info on Rv1838c/vapC13 |
| Rv2766c/- | (cc=0.4819) | info on Rv2766c/- |
| Rv1999c/- | (cc=0.4784) | info on Rv1999c/- |
Correlation of Rv3091/- with Rv0441c/-
Normalized LFCs for Rv3091/-:
(description and provenance of datasets)
| Rv3091/- | Rv0441c/- | |
| Fe_supp_jason_reseq | -1.219 | 0.071 |
| low_pH_jason_reseq | -0.467 | -0.806 |
| NO_jason_reseq | -0.047 | 0.231 |
| B6_jason_reseq | -0.054 | 0.263 |
| MHCII_jason_reseq | 0.665 | 0.644 |
| Isoniazid02 | 0.178 | 0.052 |
| Rifampicin4 | -0.406 | -0.152 |
| Ethambutol3 | 0.191 | 0.901 |
| Meropenem3 | -0.533 | -0.161 |
| Vancomycin16 | -0.08 | 0.584 |
| Rv2680_day32 | 0.061 | -1.157 |
| H37Rv_KO_MarP | 0.09 | 1.523 |
| hypoxia_3wks | -0.415 | -0.427 |
| hypoxia_6wks | -0.758 | -0.593 |
| glycerol | -0.116 | 0.0 |
| cholesterol | -0.216 | -0.235 |
| AJ | 0.402 | -0.358 |
| Bibs02 | 0.159 | -0.339 |
| Bibs02c | 0.38 | 0.735 |
| BL6 | -0.504 | -0.034 |
| BL6a | -0.623 | 0.323 |
| BXD01 | -0.765 | -1.479 |
| BXD010 | -0.516 | -0.67 |
| BXD011 | -0.615 | 1.087 |
| BXD03 | -0.608 | -1.188 |
| BXD04 | -0.355 | -0.996 |
| BXD05 | -0.711 | -0.634 |
| BXD06 | -0.744 | -0.217 |
| BXD07 | -0.796 | -1.304 |
| BXD08 | -0.096 | -0.8 |
| BXD09 | -0.552 | -0.59 |
| CAST | -0.527 | 0.16 |
| CCcont | -0.771 | -0.36 |
| DS01 | 0.183 | 0.062 |
| DS02 | 0.377 | 0.844 |
| DS04 | 0.512 | -0.256 |
| DS0c | -0.534 | 0.057 |
| GP01 | 0.566 | 0.477 |
| GP02 | -0.02 | 1.207 |
| GP0c | 0.105 | 0.241 |
| NOD | -0.291 | -0.029 |
| NZO | -0.627 | -0.763 |
| PWK | -0.112 | 0.075 |
| H37Rv_KO_CtpC | -1.014 | -0.474 |
| H37Rv_KO_CtpD | -0.557 | 0.409 |
| H37Rv_KO_Rv1272 | -0.129 | -0.364 |
| H37Rv_KO_SugABC | -0.57 | -1.385 |
| H37Rv_KO_MbtN | -1.173 | -0.86 |
| Trans05 | 0.226 | -1.459 |
| macrophage_unactivated | -0.581 | 0.559 |
| IL1 | 0.433 | 0.074 |
| Rapamycin | 0.792 | 1.025 |
| Tcell | -0.482 | -0.081 |
| GMCSF | 0.417 | 1.233 |
| IFNab | 0.408 | 1.158 |
| IFNg | 0.588 | 0.839 |
| IFNg_GMCSF1 | 0.273 | 2.228 |
| Rv1432_day32 | -0.009 | 1.949 |
| Rv1565c_day32 | 0.6 | 0.33 |
| secA2_input | 0.341 | 0.153 |
| delta_Rv3594 | -0.089 | -0.915 |
| delta_Rv3717 | -0.04 | -0.638 |
| delta_Rv3811 | -0.793 | -0.754 |
| delta_Rv0954 | -0.509 | -0.704 |
| PonA1 | -0.418 | 0.23 |
| EccD1_KO | 0.056 | 1.411 |
| EspI_KO | 0.214 | 0.819 |
| PE35_KO | 0.265 | 0.47 |
| PPE68_KO | 0.467 | 0.384 |
| glycerol2 | 0.07 | 0.56 |
| lignocerate | 0.329 | 0.773 |
| oleate | -0.013 | 0.207 |
| phosphatidylcholine | 0.427 | 0.28 |
| acetate | -0.071 | 1.022 |
| glucAc | -0.09 | 0.985 |
| Rv0950ko | 0.127 | 0.326 |
| Rv1096ko | 0.666 | 0.03 |
| Rv3684ko | 0.0 | -0.495 |
| delta_otsA_trehalose | 0.276 | 0.906 |