Top 10 genes with highest correlation to Rv3079c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2297/- | (cc=0.4974) | info on Rv2297/- |
| Rv3040c/- | (cc=0.4692) | info on Rv3040c/- |
| Rv1168c/PPE17 | (cc=0.4475) | info on Rv1168c/PPE17 |
| Rv2410c/- | (cc=0.4343) | info on Rv2410c/- |
| Rv1074c/fadA3 | (cc=0.4326) | info on Rv1074c/fadA3 |
| Rv1208/gpgS | (cc=0.4307) | info on Rv1208/gpgS |
| Rv0853c/pdc | (cc=0.4291) | info on Rv0853c/pdc |
| Rv0865/mog | (cc=0.4272) | info on Rv0865/mog |
| Rv2624c/- | (cc=0.4272) | info on Rv2624c/- |
| Rv3057c/- | (cc=0.4262) | info on Rv3057c/- |
Correlation of Rv3079c/- with Rv0853c/pdc
Normalized LFCs for Rv3079c/-:
(description and provenance of datasets)
| Rv3079c/- | Rv0853c/pdc | |
| Fe_supp_jason_reseq | 0.715 | -0.346 |
| low_pH_jason_reseq | 0.089 | -0.278 |
| NO_jason_reseq | -0.234 | -1.189 |
| B6_jason_reseq | 0.403 | 0.341 |
| MHCII_jason_reseq | -0.193 | 0.358 |
| Isoniazid02 | 0.391 | 0.137 |
| Rifampicin4 | 0.382 | 0.255 |
| Ethambutol3 | 0.866 | 0.663 |
| Meropenem3 | 0.178 | 0.089 |
| Vancomycin16 | 0.536 | 0.141 |
| Rv2680_day32 | 0.215 | -0.592 |
| H37Rv_KO_MarP | -0.308 | -0.135 |
| hypoxia_3wks | -0.315 | -0.407 |
| hypoxia_6wks | -0.267 | 0.238 |
| glycerol | -0.363 | -0.35 |
| cholesterol | 0.255 | -0.408 |
| AJ | -0.647 | -0.632 |
| Bibs02 | 0.668 | -0.196 |
| Bibs02c | -0.203 | -0.797 |
| BL6 | -0.473 | -0.283 |
| BL6a | -0.25 | -0.088 |
| BXD01 | 0.387 | 0.064 |
| BXD010 | 0.254 | 0.35 |
| BXD011 | -0.281 | 0.197 |
| BXD03 | -0.424 | -0.04 |
| BXD04 | -0.516 | 0.222 |
| BXD05 | -0.575 | 0.33 |
| BXD06 | 0.11 | 0.304 |
| BXD07 | -0.422 | 0.161 |
| BXD08 | 0.604 | 0.039 |
| BXD09 | -0.087 | -0.196 |
| CAST | -0.093 | -0.878 |
| CCcont | -0.794 | -0.032 |
| DS01 | -0.229 | 0.366 |
| DS02 | -0.072 | 0.581 |
| DS04 | -0.245 | 0.594 |
| DS0c | -0.058 | -0.08 |
| GP01 | -0.87 | -1.223 |
| GP02 | 0.479 | -0.166 |
| GP0c | -0.622 | -0.442 |
| NOD | -0.317 | 1.1 |
| NZO | -1.061 | -0.328 |
| PWK | 0.357 | -0.117 |
| H37Rv_KO_CtpC | 0.607 | -0.035 |
| H37Rv_KO_CtpD | 0.772 | 0.421 |
| H37Rv_KO_Rv1272 | 0.248 | 0.164 |
| H37Rv_KO_SugABC | -0.118 | 0.225 |
| H37Rv_KO_MbtN | -0.526 | 0.386 |
| Trans05 | -0.053 | 0.863 |
| macrophage_unactivated | 0.786 | 0.903 |
| IL1 | 1.308 | 0.543 |
| Rapamycin | 0.954 | 0.384 |
| Tcell | -0.186 | -0.029 |
| GMCSF | 0.779 | 0.261 |
| IFNab | 0.656 | 0.245 |
| IFNg | 1.323 | 0.147 |
| IFNg_GMCSF1 | 1.471 | 1.178 |
| Rv1432_day32 | 0.412 | 0.287 |
| Rv1565c_day32 | 0.6 | 0.077 |
| secA2_input | -1.335 | -0.363 |
| delta_Rv3594 | 0.283 | 0.54 |
| delta_Rv3717 | -0.789 | -0.083 |
| delta_Rv3811 | -0.706 | 0.4 |
| delta_Rv0954 | 0.013 | 0.017 |
| PonA1 | -0.203 | -0.015 |
| EccD1_KO | 1.161 | 0.204 |
| EspI_KO | 2.042 | 1.084 |
| PE35_KO | 1.059 | 0.268 |
| PPE68_KO | 1.193 | 0.72 |
| glycerol2 | 0.362 | 0.31 |
| lignocerate | -0.25 | 0.723 |
| oleate | 0.652 | 0.169 |
| phosphatidylcholine | 0.581 | 0.132 |
| acetate | -0.341 | -0.598 |
| glucAc | -1.227 | -0.154 |
| Rv0950ko | 0.347 | -0.567 |
| Rv1096ko | 1.059 | 0.419 |
| Rv3684ko | 0.583 | 0.147 |
| delta_otsA_trehalose | 1.549 | -0.022 |