Top 10 genes with highest correlation to Rv3064c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0281/- | (cc=0.4621) | info on Rv0281/- |
| Rv3321c/vapB44 | (cc=0.4512) | info on Rv3321c/vapB44 |
| Rv3468c/- | (cc=0.4473) | info on Rv3468c/- |
| Rv0997/- | (cc=0.4449) | info on Rv0997/- |
| Rv2689c/- | (cc=0.4438) | info on Rv2689c/- |
| Rv2575/- | (cc=0.4329) | info on Rv2575/- |
| Rv0442c/PPE10 | (cc=0.432) | info on Rv0442c/PPE10 |
| Rv1562c/treZ | (cc=0.4305) | info on Rv1562c/treZ |
| Rv3819/- | (cc=0.4286) | info on Rv3819/- |
| Rv2463/lipP | (cc=0.4163) | info on Rv2463/lipP |
Correlation of Rv3064c/- with Rv0442c/PPE10
Normalized LFCs for Rv3064c/-:
(description and provenance of datasets)
| Rv3064c/- | Rv0442c/PPE10 | |
| Fe_supp_jason_reseq | -0.497 | -0.26 |
| low_pH_jason_reseq | -0.074 | -0.221 |
| NO_jason_reseq | 0.194 | 0.228 |
| B6_jason_reseq | -0.165 | -0.059 |
| MHCII_jason_reseq | -0.668 | -0.082 |
| Isoniazid02 | 0.374 | 0.109 |
| Rifampicin4 | 0.485 | -0.089 |
| Ethambutol3 | 1.597 | 0.0 |
| Meropenem3 | 0.156 | 0.127 |
| Vancomycin16 | 0.379 | -0.029 |
| Rv2680_day32 | 0.261 | 0.028 |
| H37Rv_KO_MarP | 0.509 | 0.285 |
| hypoxia_3wks | -0.355 | -0.654 |
| hypoxia_6wks | -0.699 | -0.038 |
| glycerol | -0.288 | -0.518 |
| cholesterol | 0.041 | -0.426 |
| AJ | 0.055 | 0.121 |
| Bibs02 | -0.282 | -0.469 |
| Bibs02c | -0.071 | -0.082 |
| BL6 | 0.312 | -0.557 |
| BL6a | 0.11 | -0.298 |
| BXD01 | 0.424 | -0.367 |
| BXD010 | 0.106 | -0.524 |
| BXD011 | 0.176 | -0.383 |
| BXD03 | 0.081 | -0.879 |
| BXD04 | 0.39 | -0.667 |
| BXD05 | 0.429 | -0.413 |
| BXD06 | 0.333 | -0.318 |
| BXD07 | 0.431 | -0.313 |
| BXD08 | 1.596 | 0.158 |
| BXD09 | 0.65 | -0.343 |
| CAST | -0.182 | -0.21 |
| CCcont | 0.194 | -0.393 |
| DS01 | 0.356 | -0.395 |
| DS02 | -0.011 | 0.395 |
| DS04 | 0.684 | -0.028 |
| DS0c | -0.754 | -0.413 |
| GP01 | -0.324 | 0.024 |
| GP02 | 0.247 | 1.034 |
| GP0c | -0.74 | -0.278 |
| NOD | 0.747 | 0.286 |
| NZO | -0.107 | -0.289 |
| PWK | -0.038 | -0.21 |
| H37Rv_KO_CtpC | -0.015 | -0.499 |
| H37Rv_KO_CtpD | 0.094 | -0.397 |
| H37Rv_KO_Rv1272 | 0.45 | 0.093 |
| H37Rv_KO_SugABC | 0.748 | 0.723 |
| H37Rv_KO_MbtN | 0.295 | -0.35 |
| Trans05 | -0.322 | -0.849 |
| macrophage_unactivated | -0.095 | -0.085 |
| IL1 | -0.421 | 0.053 |
| Rapamycin | -0.47 | 0.135 |
| Tcell | 0.016 | -0.209 |
| GMCSF | 1.22 | 0.383 |
| IFNab | -0.03 | -0.281 |
| IFNg | 0.067 | 0.321 |
| IFNg_GMCSF1 | -0.786 | 0.776 |
| Rv1432_day32 | 0.034 | 0.31 |
| Rv1565c_day32 | 2.243 | -0.03 |
| secA2_input | -0.246 | -0.462 |
| delta_Rv3594 | -0.177 | -0.04 |
| delta_Rv3717 | -0.588 | -0.054 |
| delta_Rv3811 | -0.467 | -0.69 |
| delta_Rv0954 | -0.363 | -0.554 |
| PonA1 | -0.37 | -0.576 |
| EccD1_KO | -0.099 | -0.312 |
| EspI_KO | -0.513 | 0.228 |
| PE35_KO | -0.07 | -0.277 |
| PPE68_KO | 0.019 | -0.179 |
| glycerol2 | 0.416 | 0.345 |
| lignocerate | 0.608 | 0.928 |
| oleate | 0.346 | -0.421 |
| phosphatidylcholine | 0.706 | 0.536 |
| acetate | 0.672 | 0.618 |
| glucAc | 1.074 | 0.624 |
| Rv0950ko | 0.196 | 0.389 |
| Rv1096ko | -0.045 | 0.296 |
| Rv3684ko | 0.295 | 0.622 |
| delta_otsA_trehalose | 2.722 | 1.603 |