Top 10 genes with highest correlation to Rv3064c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0281/- | (cc=0.4621) | info on Rv0281/- |
| Rv3321c/vapB44 | (cc=0.4512) | info on Rv3321c/vapB44 |
| Rv3468c/- | (cc=0.4473) | info on Rv3468c/- |
| Rv0997/- | (cc=0.4449) | info on Rv0997/- |
| Rv2689c/- | (cc=0.4438) | info on Rv2689c/- |
| Rv2575/- | (cc=0.4329) | info on Rv2575/- |
| Rv0442c/PPE10 | (cc=0.432) | info on Rv0442c/PPE10 |
| Rv1562c/treZ | (cc=0.4305) | info on Rv1562c/treZ |
| Rv3819/- | (cc=0.4286) | info on Rv3819/- |
| Rv2463/lipP | (cc=0.4163) | info on Rv2463/lipP |
Correlation of Rv3064c/- with Rv0281/-
Normalized LFCs for Rv3064c/-:
(description and provenance of datasets)
| Rv3064c/- | Rv0281/- | |
| Fe_supp_jason_reseq | -0.497 | -0.451 |
| low_pH_jason_reseq | -0.074 | -1.598 |
| NO_jason_reseq | 0.194 | 0.249 |
| B6_jason_reseq | -0.165 | -0.917 |
| MHCII_jason_reseq | -0.668 | -0.72 |
| Isoniazid02 | 0.374 | 0.163 |
| Rifampicin4 | 0.485 | -0.525 |
| Ethambutol3 | 1.597 | 0.59 |
| Meropenem3 | 0.156 | 0.501 |
| Vancomycin16 | 0.379 | -0.157 |
| Rv2680_day32 | 0.261 | 0.399 |
| H37Rv_KO_MarP | 0.509 | 0.349 |
| hypoxia_3wks | -0.355 | -0.06 |
| hypoxia_6wks | -0.699 | -0.161 |
| glycerol | -0.288 | -0.019 |
| cholesterol | 0.041 | -0.593 |
| AJ | 0.055 | -0.057 |
| Bibs02 | -0.282 | 0.596 |
| Bibs02c | -0.071 | 0.881 |
| BL6 | 0.312 | -0.994 |
| BL6a | 0.11 | -0.059 |
| BXD01 | 0.424 | -0.496 |
| BXD010 | 0.106 | -1.004 |
| BXD011 | 0.176 | -0.433 |
| BXD03 | 0.081 | 0.213 |
| BXD04 | 0.39 | -0.067 |
| BXD05 | 0.429 | -0.08 |
| BXD06 | 0.333 | -0.843 |
| BXD07 | 0.431 | -0.557 |
| BXD08 | 1.596 | 0.025 |
| BXD09 | 0.65 | -0.606 |
| CAST | -0.182 | 0.0 |
| CCcont | 0.194 | -0.439 |
| DS01 | 0.356 | -0.253 |
| DS02 | -0.011 | -0.221 |
| DS04 | 0.684 | 0.645 |
| DS0c | -0.754 | 0.052 |
| GP01 | -0.324 | -0.455 |
| GP02 | 0.247 | 0.222 |
| GP0c | -0.74 | -0.333 |
| NOD | 0.747 | -0.705 |
| NZO | -0.107 | -0.831 |
| PWK | -0.038 | -0.328 |
| H37Rv_KO_CtpC | -0.015 | 0.092 |
| H37Rv_KO_CtpD | 0.094 | -0.584 |
| H37Rv_KO_Rv1272 | 0.45 | -0.618 |
| H37Rv_KO_SugABC | 0.748 | 0.796 |
| H37Rv_KO_MbtN | 0.295 | 0.272 |
| Trans05 | -0.322 | 0.012 |
| macrophage_unactivated | -0.095 | 0.202 |
| IL1 | -0.421 | -0.344 |
| Rapamycin | -0.47 | -0.028 |
| Tcell | 0.016 | 0.0 |
| GMCSF | 1.22 | 0.462 |
| IFNab | -0.03 | -0.172 |
| IFNg | 0.067 | -0.024 |
| IFNg_GMCSF1 | -0.786 | -0.211 |
| Rv1432_day32 | 0.034 | -0.317 |
| Rv1565c_day32 | 2.243 | 0.55 |
| secA2_input | -0.246 | -0.407 |
| delta_Rv3594 | -0.177 | -0.716 |
| delta_Rv3717 | -0.588 | -0.624 |
| delta_Rv3811 | -0.467 | -0.409 |
| delta_Rv0954 | -0.363 | -0.41 |
| PonA1 | -0.37 | -0.337 |
| EccD1_KO | -0.099 | -0.569 |
| EspI_KO | -0.513 | -1.494 |
| PE35_KO | -0.07 | -1.167 |
| PPE68_KO | 0.019 | -1.094 |
| glycerol2 | 0.416 | 0.646 |
| lignocerate | 0.608 | 0.549 |
| oleate | 0.346 | 0.846 |
| phosphatidylcholine | 0.706 | 0.843 |
| acetate | 0.672 | 0.037 |
| glucAc | 1.074 | -0.125 |
| Rv0950ko | 0.196 | -0.492 |
| Rv1096ko | -0.045 | -0.763 |
| Rv3684ko | 0.295 | -1.009 |
| delta_otsA_trehalose | 2.722 | 1.655 |