Top 10 genes with highest correlation to Rv2974c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3367/PE_PGRS51 | (cc=0.6262) | info on Rv3367/PE_PGRS51 |
| Rv3401/- | (cc=0.5874) | info on Rv3401/- |
| Rv2340c/PE_PGRS39 | (cc=0.5842) | info on Rv2340c/PE_PGRS39 |
| Rv0648/- | (cc=0.5761) | info on Rv0648/- |
| Rv2490c/PE_PGRS43 | (cc=0.5751) | info on Rv2490c/PE_PGRS43 |
| Rv0578c/PE_PGRS7 | (cc=0.5728) | info on Rv0578c/PE_PGRS7 |
| Rv2487c/PE_PGRS42 | (cc=0.5671) | info on Rv2487c/PE_PGRS42 |
| Rv1004c/- | (cc=0.5659) | info on Rv1004c/- |
| Rv3440c/- | (cc=0.5633) | info on Rv3440c/- |
| Rv0901/- | (cc=0.5591) | info on Rv0901/- |
Correlation of Rv2974c/- with Rv3367/PE_PGRS51
Normalized LFCs for Rv2974c/-:
(description and provenance of datasets)
| Rv2974c/- | Rv3367/PE_PGRS51 | |
| Fe_supp_jason_reseq | 0.166 | 0.23 |
| low_pH_jason_reseq | -1.497 | -1.004 |
| NO_jason_reseq | -0.071 | -0.425 |
| B6_jason_reseq | 0.326 | 0.431 |
| MHCII_jason_reseq | 0.09 | 0.767 |
| Isoniazid02 | 0.186 | -0.198 |
| Rifampicin4 | 1.134 | -0.043 |
| Ethambutol3 | 0.683 | 1.115 |
| Meropenem3 | 1.423 | 1.859 |
| Vancomycin16 | 0.422 | -0.088 |
| Rv2680_day32 | 0.458 | 0.055 |
| H37Rv_KO_MarP | -0.337 | 0.192 |
| hypoxia_3wks | 0.0 | -0.359 |
| hypoxia_6wks | -0.539 | 0.263 |
| glycerol | 1.258 | 0.802 |
| cholesterol | 0.797 | 0.504 |
| AJ | 0.477 | 0.513 |
| Bibs02 | 0.723 | 0.481 |
| Bibs02c | -0.676 | 0.55 |
| BL6 | -0.419 | -0.639 |
| BL6a | -0.933 | -0.22 |
| BXD01 | -0.53 | -0.524 |
| BXD010 | -0.032 | -0.809 |
| BXD011 | -0.472 | -0.98 |
| BXD03 | -0.304 | -0.671 |
| BXD04 | -0.108 | -0.497 |
| BXD05 | -0.466 | -0.524 |
| BXD06 | -0.739 | -0.76 |
| BXD07 | -0.37 | -0.853 |
| BXD08 | 0.355 | -0.569 |
| BXD09 | -0.662 | -0.78 |
| CAST | 0.344 | 0.409 |
| CCcont | -0.118 | -0.679 |
| DS01 | 0.676 | 0.419 |
| DS02 | 0.756 | 0.616 |
| DS04 | 0.71 | 0.195 |
| DS0c | 0.781 | -0.178 |
| GP01 | -0.682 | 0.41 |
| GP02 | 0.343 | 0.546 |
| GP0c | -0.044 | 0.191 |
| NOD | -0.197 | -0.184 |
| NZO | 0.146 | 1.272 |
| PWK | -0.067 | 0.288 |
| H37Rv_KO_CtpC | 0.157 | -0.044 |
| H37Rv_KO_CtpD | 0.933 | 0.157 |
| H37Rv_KO_Rv1272 | -0.456 | 0.291 |
| H37Rv_KO_SugABC | 0.644 | -0.072 |
| H37Rv_KO_MbtN | -0.299 | 0.833 |
| Trans05 | -0.176 | 0.326 |
| macrophage_unactivated | -1.016 | -1.095 |
| IL1 | -0.647 | -0.976 |
| Rapamycin | -0.669 | -0.5 |
| Tcell | -0.71 | -1.307 |
| GMCSF | -0.665 | -1.011 |
| IFNab | -0.088 | -1.103 |
| IFNg | -1.008 | -1.328 |
| IFNg_GMCSF1 | -0.632 | -0.462 |
| Rv1432_day32 | 0.79 | 2.471 |
| Rv1565c_day32 | -0.12 | 0.4 |
| secA2_input | 0.063 | 0.398 |
| delta_Rv3594 | 0.116 | 0.321 |
| delta_Rv3717 | 0.109 | -0.126 |
| delta_Rv3811 | -0.173 | -0.385 |
| delta_Rv0954 | -0.103 | -0.057 |
| PonA1 | 0.217 | 0.357 |
| EccD1_KO | -0.033 | 0.273 |
| EspI_KO | -0.06 | -0.123 |
| PE35_KO | -0.411 | -0.496 |
| PPE68_KO | -0.56 | -0.659 |
| glycerol2 | -0.412 | -0.552 |
| lignocerate | -0.102 | -0.058 |
| oleate | -0.198 | -0.186 |
| phosphatidylcholine | 0.098 | 0.209 |
| acetate | 0.228 | -0.655 |
| glucAc | -0.191 | -0.266 |
| Rv0950ko | 0.075 | 0.0 |
| Rv1096ko | 0.495 | 0.202 |
| Rv3684ko | 0.609 | 0.658 |
| delta_otsA_trehalose | -0.574 | 0.306 |