Top 10 genes with highest correlation to Rv2943/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3075c/- | (cc=0.4171) | info on Rv3075c/- |
| Rv0869c/moaA2 | (cc=0.4147) | info on Rv0869c/moaA2 |
| Rv3714c/- | (cc=0.4022) | info on Rv3714c/- |
| Rv1318c/- | (cc=0.4) | info on Rv1318c/- |
| Rv3032A/- | (cc=0.3907) | info on Rv3032A/- |
| Rv1440/secG | (cc=0.39) | info on Rv1440/secG |
| Rv3741c/- | (cc=0.3881) | info on Rv3741c/- |
| Rv1319c/- | (cc=0.3793) | info on Rv1319c/- |
| Rv0075/- | (cc=0.379) | info on Rv0075/- |
| Rv1513/- | (cc=0.3786) | info on Rv1513/- |
Correlation of Rv2943/- with Rv3075c/-
Normalized LFCs for Rv2943/-:
(description and provenance of datasets)
| Rv2943/- | Rv3075c/- | |
| Fe_supp_jason_reseq | 0.508 | -0.182 |
| low_pH_jason_reseq | -0.032 | 0.576 |
| NO_jason_reseq | 0.024 | -0.604 |
| B6_jason_reseq | 0.255 | -0.243 |
| MHCII_jason_reseq | -0.394 | 0.343 |
| Isoniazid02 | -0.271 | -0.386 |
| Rifampicin4 | 0.829 | -0.409 |
| Ethambutol3 | 2.239 | 2.91 |
| Meropenem3 | -0.087 | 0.41 |
| Vancomycin16 | 0.265 | 0.058 |
| Rv2680_day32 | 0.859 | 0.241 |
| H37Rv_KO_MarP | 0.528 | 0.0 |
| hypoxia_3wks | 0.642 | -0.211 |
| hypoxia_6wks | 1.157 | -0.292 |
| glycerol | 0.044 | 0.61 |
| cholesterol | -0.157 | -0.198 |
| AJ | -0.064 | -0.852 |
| Bibs02 | -0.266 | -0.276 |
| Bibs02c | 0.023 | 0.024 |
| BL6 | -0.092 | 0.05 |
| BL6a | -0.264 | -0.88 |
| BXD01 | 0.014 | -0.25 |
| BXD010 | 0.529 | -0.219 |
| BXD011 | -0.035 | -0.209 |
| BXD03 | -0.139 | 0.601 |
| BXD04 | 0.047 | 0.592 |
| BXD05 | 0.291 | -0.483 |
| BXD06 | -0.015 | -0.032 |
| BXD07 | 0.015 | 0.153 |
| BXD08 | 0.544 | 0.349 |
| BXD09 | -0.334 | -0.147 |
| CAST | -0.469 | -1.003 |
| CCcont | -0.365 | -0.009 |
| DS01 | -0.014 | -0.027 |
| DS02 | 0.715 | -0.077 |
| DS04 | 0.181 | 0.285 |
| DS0c | 0.093 | -0.212 |
| GP01 | -0.182 | -0.601 |
| GP02 | 1.555 | 0.521 |
| GP0c | -0.696 | -0.699 |
| NOD | -0.218 | 0.078 |
| NZO | -0.29 | -0.483 |
| PWK | -0.831 | -0.011 |
| H37Rv_KO_CtpC | 0.261 | 0.092 |
| H37Rv_KO_CtpD | 0.829 | 0.864 |
| H37Rv_KO_Rv1272 | -0.917 | -0.416 |
| H37Rv_KO_SugABC | -0.558 | -0.024 |
| H37Rv_KO_MbtN | 0.166 | 0.49 |
| Trans05 | -0.85 | -0.58 |
| macrophage_unactivated | 0.073 | 0.281 |
| IL1 | 0.181 | -0.092 |
| Rapamycin | -0.221 | -0.288 |
| Tcell | 0.525 | 0.762 |
| GMCSF | 0.121 | -0.248 |
| IFNab | 0.0 | 0.327 |
| IFNg | -0.192 | 0.46 |
| IFNg_GMCSF1 | -0.123 | -0.33 |
| Rv1432_day32 | 0.046 | -0.493 |
| Rv1565c_day32 | -0.167 | -0.644 |
| secA2_input | 0.784 | 0.581 |
| delta_Rv3594 | -0.772 | 0.231 |
| delta_Rv3717 | -0.327 | -0.36 |
| delta_Rv3811 | 0.083 | -0.226 |
| delta_Rv0954 | -0.065 | 0.888 |
| PonA1 | -1.334 | 1.228 |
| EccD1_KO | -0.194 | 0.385 |
| EspI_KO | -0.342 | -0.693 |
| PE35_KO | 0.233 | 0.286 |
| PPE68_KO | -0.499 | -0.48 |
| glycerol2 | 0.186 | -0.053 |
| lignocerate | 0.0 | 0.097 |
| oleate | 0.325 | 0.34 |
| phosphatidylcholine | 0.123 | 0.122 |
| acetate | -0.554 | 0.214 |
| glucAc | -0.688 | -0.189 |
| Rv0950ko | 0.66 | 0.531 |
| Rv1096ko | 0.097 | 0.431 |
| Rv3684ko | 0.079 | 1.041 |
| delta_otsA_trehalose | 0.813 | 0.296 |