Top 10 genes with highest correlation to Rv2896c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1961/- | (cc=0.4625) | info on Rv1961/- |
| Rv0976c/- | (cc=0.4607) | info on Rv0976c/- |
| Rv2159c/- | (cc=0.4461) | info on Rv2159c/- |
| Rv3292/- | (cc=0.446) | info on Rv3292/- |
| Rv2012/- | (cc=0.426) | info on Rv2012/- |
| Rv0897c/- | (cc=0.4057) | info on Rv0897c/- |
| Rv0992c/- | (cc=0.404) | info on Rv0992c/- |
| Rv0994/moeA1 | (cc=0.4033) | info on Rv0994/moeA1 |
| Rv1452c/PE_PGRS28 | (cc=0.3929) | info on Rv1452c/PE_PGRS28 |
| Rv0222/echA1 | (cc=0.3881) | info on Rv0222/echA1 |
Correlation of Rv2896c/- with Rv0994/moeA1
Normalized LFCs for Rv2896c/-:
(description and provenance of datasets)
| Rv2896c/- | Rv0994/moeA1 | |
| Fe_supp_jason_reseq | -0.685 | -0.559 |
| low_pH_jason_reseq | -0.932 | -4.603 |
| NO_jason_reseq | 0.263 | -2.371 |
| B6_jason_reseq | -0.482 | -3.282 |
| MHCII_jason_reseq | -0.754 | -1.968 |
| Isoniazid02 | 0.764 | 1.762 |
| Rifampicin4 | -0.181 | -6.0 |
| Ethambutol3 | 0.188 | -0.683 |
| Meropenem3 | 0.114 | -3.435 |
| Vancomycin16 | 0.058 | -6.0 |
| Rv2680_day32 | -0.456 | -2.48 |
| H37Rv_KO_MarP | -0.051 | -4.936 |
| hypoxia_3wks | -0.287 | -3.537 |
| hypoxia_6wks | -0.624 | -4.475 |
| glycerol | 1.546 | 0.635 |
| cholesterol | 0.503 | 2.24 |
| AJ | -0.128 | -3.387 |
| Bibs02 | 0.654 | 0.701 |
| Bibs02c | -0.115 | 0.771 |
| BL6 | 0.637 | -1.158 |
| BL6a | 0.103 | -1.995 |
| BXD01 | -0.299 | -2.963 |
| BXD010 | -0.223 | -2.049 |
| BXD011 | -0.269 | -2.485 |
| BXD03 | -0.562 | -2.38 |
| BXD04 | 0.256 | -2.412 |
| BXD05 | 0.261 | -2.625 |
| BXD06 | -0.173 | -1.272 |
| BXD07 | 0.082 | -3.024 |
| BXD08 | 0.117 | -2.42 |
| BXD09 | -0.182 | -2.741 |
| CAST | -0.108 | -3.684 |
| CCcont | -0.035 | 0.079 |
| DS01 | 0.674 | 0.587 |
| DS02 | 0.767 | 0.665 |
| DS04 | 0.706 | -0.245 |
| DS0c | 0.607 | 0.024 |
| GP01 | 0.022 | -1.998 |
| GP02 | 0.98 | -1.817 |
| GP0c | 0.465 | -2.631 |
| NOD | 0.792 | -2.262 |
| NZO | -0.078 | -3.891 |
| PWK | -0.413 | -3.342 |
| H37Rv_KO_CtpC | 0.386 | -0.437 |
| H37Rv_KO_CtpD | 0.78 | 0.612 |
| H37Rv_KO_Rv1272 | -0.435 | -2.656 |
| H37Rv_KO_SugABC | -1.474 | -1.744 |
| H37Rv_KO_MbtN | 0.529 | -0.399 |
| Trans05 | -0.377 | -1.797 |
| macrophage_unactivated | 0.18 | -0.303 |
| IL1 | 0.516 | -1.186 |
| Rapamycin | 0.206 | -0.779 |
| Tcell | -0.329 | -1.404 |
| GMCSF | -0.351 | -0.895 |
| IFNab | -0.121 | -0.218 |
| IFNg | 0.489 | -2.205 |
| IFNg_GMCSF1 | 0.179 | -2.341 |
| Rv1432_day32 | 0.738 | -3.139 |
| Rv1565c_day32 | 0.491 | -2.019 |
| secA2_input | 0.435 | 0.374 |
| delta_Rv3594 | -0.286 | -1.366 |
| delta_Rv3717 | 0.083 | -0.999 |
| delta_Rv3811 | 0.0 | -0.674 |
| delta_Rv0954 | -0.261 | -0.508 |
| PonA1 | -0.485 | -0.454 |
| EccD1_KO | -0.145 | 0.776 |
| EspI_KO | -0.083 | 0.436 |
| PE35_KO | 0.545 | 0.977 |
| PPE68_KO | 0.518 | 0.79 |
| glycerol2 | -0.303 | 0.914 |
| lignocerate | 0.558 | -0.424 |
| oleate | -0.072 | -0.315 |
| phosphatidylcholine | 0.31 | -0.679 |
| acetate | 0.472 | -0.178 |
| glucAc | 0.304 | -0.229 |
| Rv0950ko | 0.172 | 0.377 |
| Rv1096ko | 0.829 | 0.666 |
| Rv3684ko | 0.576 | -0.144 |
| delta_otsA_trehalose | -0.416 | 0.368 |