Top 10 genes with highest correlation to Rv2896c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1961/- | (cc=0.4625) | info on Rv1961/- |
| Rv0976c/- | (cc=0.4607) | info on Rv0976c/- |
| Rv2159c/- | (cc=0.4461) | info on Rv2159c/- |
| Rv3292/- | (cc=0.446) | info on Rv3292/- |
| Rv2012/- | (cc=0.426) | info on Rv2012/- |
| Rv0897c/- | (cc=0.4057) | info on Rv0897c/- |
| Rv0992c/- | (cc=0.404) | info on Rv0992c/- |
| Rv0994/moeA1 | (cc=0.4033) | info on Rv0994/moeA1 |
| Rv1452c/PE_PGRS28 | (cc=0.3929) | info on Rv1452c/PE_PGRS28 |
| Rv0222/echA1 | (cc=0.3881) | info on Rv0222/echA1 |
Correlation of Rv2896c/- with Rv0222/echA1
Normalized LFCs for Rv2896c/-:
(description and provenance of datasets)
| Rv2896c/- | Rv0222/echA1 | |
| Fe_supp_jason_reseq | -0.685 | -3.435 |
| low_pH_jason_reseq | -0.932 | -2.431 |
| NO_jason_reseq | 0.263 | 0.465 |
| B6_jason_reseq | -0.482 | -3.258 |
| MHCII_jason_reseq | -0.754 | -1.782 |
| Isoniazid02 | 0.764 | -0.8 |
| Rifampicin4 | -0.181 | -0.582 |
| Ethambutol3 | 0.188 | -0.164 |
| Meropenem3 | 0.114 | -0.258 |
| Vancomycin16 | 0.058 | -0.57 |
| Rv2680_day32 | -0.456 | -0.048 |
| H37Rv_KO_MarP | -0.051 | -0.138 |
| hypoxia_3wks | -0.287 | 0.63 |
| hypoxia_6wks | -0.624 | -0.065 |
| glycerol | 1.546 | -0.035 |
| cholesterol | 0.503 | 0.861 |
| AJ | -0.128 | 0.442 |
| Bibs02 | 0.654 | -0.237 |
| Bibs02c | -0.115 | -0.887 |
| BL6 | 0.637 | 1.376 |
| BL6a | 0.103 | 0.672 |
| BXD01 | -0.299 | -0.046 |
| BXD010 | -0.223 | -0.191 |
| BXD011 | -0.269 | 1.09 |
| BXD03 | -0.562 | 1.092 |
| BXD04 | 0.256 | 2.172 |
| BXD05 | 0.261 | 1.202 |
| BXD06 | -0.173 | 0.293 |
| BXD07 | 0.082 | 0.891 |
| BXD08 | 0.117 | 1.148 |
| BXD09 | -0.182 | 0.863 |
| CAST | -0.108 | 0.662 |
| CCcont | -0.035 | 0.75 |
| DS01 | 0.674 | -0.306 |
| DS02 | 0.767 | 0.625 |
| DS04 | 0.706 | 2.54 |
| DS0c | 0.607 | 0.317 |
| GP01 | 0.022 | 1.765 |
| GP02 | 0.98 | 1.928 |
| GP0c | 0.465 | 1.358 |
| NOD | 0.792 | 1.741 |
| NZO | -0.078 | -0.035 |
| PWK | -0.413 | -0.78 |
| H37Rv_KO_CtpC | 0.386 | 0.028 |
| H37Rv_KO_CtpD | 0.78 | 1.355 |
| H37Rv_KO_Rv1272 | -0.435 | -0.025 |
| H37Rv_KO_SugABC | -1.474 | 0.682 |
| H37Rv_KO_MbtN | 0.529 | 2.338 |
| Trans05 | -0.377 | -1.09 |
| macrophage_unactivated | 0.18 | -0.035 |
| IL1 | 0.516 | 1.207 |
| Rapamycin | 0.206 | 0.767 |
| Tcell | -0.329 | 0.342 |
| GMCSF | -0.351 | 0.539 |
| IFNab | -0.121 | -0.133 |
| IFNg | 0.489 | 0.059 |
| IFNg_GMCSF1 | 0.179 | 0.101 |
| Rv1432_day32 | 0.738 | 0.18 |
| Rv1565c_day32 | 0.491 | 0.025 |
| secA2_input | 0.435 | -0.794 |
| delta_Rv3594 | -0.286 | -0.187 |
| delta_Rv3717 | 0.083 | -0.607 |
| delta_Rv3811 | 0.0 | -0.379 |
| delta_Rv0954 | -0.261 | -0.242 |
| PonA1 | -0.485 | -0.435 |
| EccD1_KO | -0.145 | -1.727 |
| EspI_KO | -0.083 | -0.268 |
| PE35_KO | 0.545 | 0.175 |
| PPE68_KO | 0.518 | -0.909 |
| glycerol2 | -0.303 | -0.888 |
| lignocerate | 0.558 | -0.919 |
| oleate | -0.072 | -0.207 |
| phosphatidylcholine | 0.31 | -0.689 |
| acetate | 0.472 | -0.447 |
| glucAc | 0.304 | -1.339 |
| Rv0950ko | 0.172 | 0.751 |
| Rv1096ko | 0.829 | 1.3 |
| Rv3684ko | 0.576 | 0.0 |
| delta_otsA_trehalose | -0.416 | -0.267 |