Top 10 genes with highest correlation to Rv2884/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1073/- | (cc=0.4757) | info on Rv1073/- |
| Rv2881c/cdsA | (cc=0.4711) | info on Rv2881c/cdsA |
| Rv2819c/- | (cc=0.4686) | info on Rv2819c/- |
| Rv2774c/- | (cc=0.4581) | info on Rv2774c/- |
| Rv0760c/- | (cc=0.444) | info on Rv0760c/- |
| Rv2570/- | (cc=0.4419) | info on Rv2570/- |
| Rv2269c/- | (cc=0.4365) | info on Rv2269c/- |
| Rv1354c/- | (cc=0.4246) | info on Rv1354c/- |
| Rv2810c/- | (cc=0.4222) | info on Rv2810c/- |
| Rv2847c/cysG | (cc=0.4123) | info on Rv2847c/cysG |
Correlation of Rv2884/- with Rv2881c/cdsA
Normalized LFCs for Rv2884/-:
(description and provenance of datasets)
| Rv2884/- | Rv2881c/cdsA | |
| Fe_supp_jason_reseq | -0.466 | 0.0 |
| low_pH_jason_reseq | 0.294 | 0.284 |
| NO_jason_reseq | -1.483 | -1.42 |
| B6_jason_reseq | 0.101 | -0.103 |
| MHCII_jason_reseq | 0.356 | -0.663 |
| Isoniazid02 | 0.796 | 0.0 |
| Rifampicin4 | -0.717 | 0.0 |
| Ethambutol3 | 0.393 | 0.0 |
| Meropenem3 | -0.113 | 0.0 |
| Vancomycin16 | -0.515 | 0.366 |
| Rv2680_day32 | -0.151 | -0.131 |
| H37Rv_KO_MarP | -0.666 | -0.291 |
| hypoxia_3wks | -0.319 | 0.0 |
| hypoxia_6wks | -0.094 | 0.0 |
| glycerol | 0.057 | -0.202 |
| cholesterol | -0.684 | -0.145 |
| AJ | -0.682 | -0.232 |
| Bibs02 | 0.229 | -0.183 |
| Bibs02c | 0.209 | -0.209 |
| BL6 | -0.859 | -0.125 |
| BL6a | 0.346 | 0.901 |
| BXD01 | 0.248 | 0.328 |
| BXD010 | -0.531 | 1.098 |
| BXD011 | 0.359 | 2.555 |
| BXD03 | 0.672 | 0.0 |
| BXD04 | -0.274 | -0.124 |
| BXD05 | -0.191 | 1.667 |
| BXD06 | -0.265 | 0.687 |
| BXD07 | -0.407 | 0.126 |
| BXD08 | 0.555 | 0.431 |
| BXD09 | 0.375 | 0.802 |
| CAST | 0.169 | 0.581 |
| CCcont | -0.043 | 0.261 |
| DS01 | 0.067 | 0.216 |
| DS02 | 0.414 | 0.704 |
| DS04 | -0.523 | -0.194 |
| DS0c | 0.0 | 0.0 |
| GP01 | 1.34 | 0.564 |
| GP02 | 0.693 | 0.901 |
| GP0c | 0.639 | 1.788 |
| NOD | 0.532 | 1.731 |
| NZO | -0.178 | -0.199 |
| PWK | 0.279 | -0.196 |
| H37Rv_KO_CtpC | -0.015 | 0.637 |
| H37Rv_KO_CtpD | -1.213 | 1.951 |
| H37Rv_KO_Rv1272 | 2.348 | 1.022 |
| H37Rv_KO_SugABC | 0.107 | -0.099 |
| H37Rv_KO_MbtN | 1.712 | -0.103 |
| Trans05 | 1.374 | 2.824 |
| macrophage_unactivated | -0.363 | -0.398 |
| IL1 | 0.0 | -0.78 |
| Rapamycin | -0.353 | -0.387 |
| Tcell | 0.567 | 0.375 |
| GMCSF | 0.657 | -0.333 |
| IFNab | 0.254 | -0.795 |
| IFNg | -0.885 | -0.703 |
| IFNg_GMCSF1 | -0.157 | -0.826 |
| Rv1432_day32 | -0.222 | 0.0 |
| Rv1565c_day32 | -0.828 | 0.0 |
| secA2_input | -0.538 | -0.348 |
| delta_Rv3594 | 0.089 | -0.997 |
| delta_Rv3717 | -0.24 | 0.081 |
| delta_Rv3811 | -0.516 | -1.3 |
| delta_Rv0954 | -0.262 | -0.274 |
| PonA1 | -0.538 | -0.077 |
| EccD1_KO | 0.342 | 1.924 |
| EspI_KO | 0.684 | 0.633 |
| PE35_KO | 1.333 | 3.564 |
| PPE68_KO | 1.872 | 2.121 |
| glycerol2 | 0.077 | 0.104 |
| lignocerate | -0.267 | -0.96 |
| oleate | 0.391 | -0.483 |
| phosphatidylcholine | 0.464 | -0.478 |
| acetate | -0.364 | -1.31 |
| glucAc | -0.944 | -0.456 |
| Rv0950ko | -0.422 | 0.211 |
| Rv1096ko | -0.685 | -0.706 |
| Rv3684ko | -0.033 | -0.766 |
| delta_otsA_trehalose | -0.427 | -0.232 |