Top 10 genes with highest correlation to Rv2884/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1073/- | (cc=0.4757) | info on Rv1073/- |
| Rv2881c/cdsA | (cc=0.4711) | info on Rv2881c/cdsA |
| Rv2819c/- | (cc=0.4686) | info on Rv2819c/- |
| Rv2774c/- | (cc=0.4581) | info on Rv2774c/- |
| Rv0760c/- | (cc=0.444) | info on Rv0760c/- |
| Rv2570/- | (cc=0.4419) | info on Rv2570/- |
| Rv2269c/- | (cc=0.4365) | info on Rv2269c/- |
| Rv1354c/- | (cc=0.4246) | info on Rv1354c/- |
| Rv2810c/- | (cc=0.4222) | info on Rv2810c/- |
| Rv2847c/cysG | (cc=0.4123) | info on Rv2847c/cysG |
Correlation of Rv2884/- with Rv2570/-
Normalized LFCs for Rv2884/-:
(description and provenance of datasets)
| Rv2884/- | Rv2570/- | |
| Fe_supp_jason_reseq | -0.466 | 0.283 |
| low_pH_jason_reseq | 0.294 | -0.109 |
| NO_jason_reseq | -1.483 | 0.357 |
| B6_jason_reseq | 0.101 | -0.836 |
| MHCII_jason_reseq | 0.356 | -0.564 |
| Isoniazid02 | 0.796 | 0.135 |
| Rifampicin4 | -0.717 | -0.931 |
| Ethambutol3 | 0.393 | 3.807 |
| Meropenem3 | -0.113 | -0.883 |
| Vancomycin16 | -0.515 | -0.825 |
| Rv2680_day32 | -0.151 | -0.047 |
| H37Rv_KO_MarP | -0.666 | 0.365 |
| hypoxia_3wks | -0.319 | -0.283 |
| hypoxia_6wks | -0.094 | -1.132 |
| glycerol | 0.057 | 0.407 |
| cholesterol | -0.684 | 1.387 |
| AJ | -0.682 | 1.239 |
| Bibs02 | 0.229 | 1.927 |
| Bibs02c | 0.209 | -0.321 |
| BL6 | -0.859 | -2.467 |
| BL6a | 0.346 | 0.151 |
| BXD01 | 0.248 | -0.648 |
| BXD010 | -0.531 | 0.57 |
| BXD011 | 0.359 | -0.02 |
| BXD03 | 0.672 | 0.656 |
| BXD04 | -0.274 | -0.896 |
| BXD05 | -0.191 | -0.539 |
| BXD06 | -0.265 | -0.36 |
| BXD07 | -0.407 | -0.238 |
| BXD08 | 0.555 | -0.179 |
| BXD09 | 0.375 | -0.165 |
| CAST | 0.169 | 0.072 |
| CCcont | -0.043 | -2.66 |
| DS01 | 0.067 | 1.001 |
| DS02 | 0.414 | 0.654 |
| DS04 | -0.523 | -1.015 |
| DS0c | 0.0 | 0.068 |
| GP01 | 1.34 | 1.502 |
| GP02 | 0.693 | 2.478 |
| GP0c | 0.639 | 1.302 |
| NOD | 0.532 | -0.225 |
| NZO | -0.178 | 0.062 |
| PWK | 0.279 | 1.138 |
| H37Rv_KO_CtpC | -0.015 | 0.564 |
| H37Rv_KO_CtpD | -1.213 | -1.044 |
| H37Rv_KO_Rv1272 | 2.348 | 1.566 |
| H37Rv_KO_SugABC | 0.107 | 1.261 |
| H37Rv_KO_MbtN | 1.712 | -1.461 |
| Trans05 | 1.374 | 3.287 |
| macrophage_unactivated | -0.363 | -1.509 |
| IL1 | 0.0 | -1.735 |
| Rapamycin | -0.353 | -2.955 |
| Tcell | 0.567 | 0.235 |
| GMCSF | 0.657 | -2.181 |
| IFNab | 0.254 | 0.323 |
| IFNg | -0.885 | -0.529 |
| IFNg_GMCSF1 | -0.157 | -1.04 |
| Rv1432_day32 | -0.222 | 0.421 |
| Rv1565c_day32 | -0.828 | 0.415 |
| secA2_input | -0.538 | -1.542 |
| delta_Rv3594 | 0.089 | 0.488 |
| delta_Rv3717 | -0.24 | -0.216 |
| delta_Rv3811 | -0.516 | 0.531 |
| delta_Rv0954 | -0.262 | -0.557 |
| PonA1 | -0.538 | -0.263 |
| EccD1_KO | 0.342 | 1.865 |
| EspI_KO | 0.684 | 3.522 |
| PE35_KO | 1.333 | 2.891 |
| PPE68_KO | 1.872 | 2.473 |
| glycerol2 | 0.077 | -1.892 |
| lignocerate | -0.267 | -2.484 |
| oleate | 0.391 | -0.58 |
| phosphatidylcholine | 0.464 | -1.377 |
| acetate | -0.364 | -2.151 |
| glucAc | -0.944 | -4.829 |
| Rv0950ko | -0.422 | -0.865 |
| Rv1096ko | -0.685 | -0.145 |
| Rv3684ko | -0.033 | -1.182 |
| delta_otsA_trehalose | -0.427 | 0.243 |