Top 10 genes with highest correlation to Rv2873/mpt83:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1004c/- | (cc=0.4312) | info on Rv1004c/- |
| Rv3729/- | (cc=0.4295) | info on Rv3729/- |
| Rv2974c/- | (cc=0.4258) | info on Rv2974c/- |
| Rv0393/- | (cc=0.4252) | info on Rv0393/- |
| Rv2016/- | (cc=0.4248) | info on Rv2016/- |
| Rv3758c/proV | (cc=0.4213) | info on Rv3758c/proV |
| Rv2312/- | (cc=0.4058) | info on Rv2312/- |
| Rv0409/ackA | (cc=0.3935) | info on Rv0409/ackA |
| Rv0492c/- | (cc=0.3785) | info on Rv0492c/- |
| Rv1468c/PE_PGRS29 | (cc=0.3778) | info on Rv1468c/PE_PGRS29 |
Correlation of Rv2873/mpt83 with Rv1468c/PE_PGRS29
Normalized LFCs for Rv2873/mpt83:
(description and provenance of datasets)
| Rv2873/mpt83 | Rv1468c/PE_PGRS29 | |
| Fe_supp_jason_reseq | -0.467 | 0.425 |
| low_pH_jason_reseq | -0.892 | 0.274 |
| NO_jason_reseq | -0.021 | -1.229 |
| B6_jason_reseq | -0.028 | -0.718 |
| MHCII_jason_reseq | -0.9 | -0.801 |
| Isoniazid02 | 0.137 | 0.303 |
| Rifampicin4 | 0.024 | 1.968 |
| Ethambutol3 | 0.323 | 1.278 |
| Meropenem3 | 1.144 | 1.473 |
| Vancomycin16 | 0.138 | 0.43 |
| Rv2680_day32 | 0.296 | -0.64 |
| H37Rv_KO_MarP | 0.095 | -0.049 |
| hypoxia_3wks | -0.207 | -0.694 |
| hypoxia_6wks | 0.157 | -0.735 |
| glycerol | -0.149 | 0.0 |
| cholesterol | 0.86 | -0.388 |
| AJ | -0.055 | 1.612 |
| Bibs02 | 0.232 | 0.389 |
| Bibs02c | 0.065 | 0.0 |
| BL6 | -0.458 | -0.835 |
| BL6a | -0.453 | 0.0 |
| BXD01 | -0.476 | 0.235 |
| BXD010 | 0.03 | -0.675 |
| BXD011 | -0.073 | -0.078 |
| BXD03 | -0.762 | -0.2 |
| BXD04 | -0.569 | 0.024 |
| BXD05 | -0.555 | 0.308 |
| BXD06 | 0.042 | -0.428 |
| BXD07 | -0.743 | 0.339 |
| BXD08 | -0.345 | 0.519 |
| BXD09 | -0.699 | 0.054 |
| CAST | -0.27 | 0.415 |
| CCcont | -0.285 | 0.168 |
| DS01 | 0.412 | 0.652 |
| DS02 | 0.479 | 0.789 |
| DS04 | -0.298 | 1.835 |
| DS0c | 0.987 | -0.178 |
| GP01 | 0.659 | 1.93 |
| GP02 | -1.038 | 0.863 |
| GP0c | 0.927 | 1.155 |
| NOD | -0.091 | -0.436 |
| NZO | -0.477 | 0.751 |
| PWK | 0.193 | 0.254 |
| H37Rv_KO_CtpC | 0.883 | 1.094 |
| H37Rv_KO_CtpD | 0.845 | 2.032 |
| H37Rv_KO_Rv1272 | 0.284 | 1.204 |
| H37Rv_KO_SugABC | 0.565 | 0.346 |
| H37Rv_KO_MbtN | -0.139 | 1.692 |
| Trans05 | 0.156 | -0.193 |
| macrophage_unactivated | -0.966 | -0.117 |
| IL1 | -0.86 | -0.169 |
| Rapamycin | 0.04 | -0.608 |
| Tcell | -0.355 | 0.059 |
| GMCSF | 0.0 | 0.143 |
| IFNab | -1.557 | -0.599 |
| IFNg | -0.329 | -1.141 |
| IFNg_GMCSF1 | -0.167 | 0.798 |
| Rv1432_day32 | 0.145 | 0.07 |
| Rv1565c_day32 | -1.518 | -1.33 |
| secA2_input | 0.549 | -0.462 |
| delta_Rv3594 | 0.445 | 0.6 |
| delta_Rv3717 | 0.148 | 0.865 |
| delta_Rv3811 | -0.428 | 0.708 |
| delta_Rv0954 | 1.56 | 1.499 |
| PonA1 | -0.017 | 0.99 |
| EccD1_KO | 0.395 | -0.523 |
| EspI_KO | -1.195 | -0.787 |
| PE35_KO | -0.493 | -0.505 |
| PPE68_KO | -0.621 | -0.291 |
| glycerol2 | 0.059 | -0.22 |
| lignocerate | 0.306 | 0.033 |
| oleate | -0.077 | 0.057 |
| phosphatidylcholine | 0.087 | -0.262 |
| acetate | 0.052 | -0.163 |
| glucAc | -0.314 | -0.491 |
| Rv0950ko | 0.232 | 0.202 |
| Rv1096ko | 0.066 | -0.127 |
| Rv3684ko | -0.187 | 0.177 |
| delta_otsA_trehalose | -1.475 | 0.284 |