Top 10 genes with highest correlation to Rv2873/mpt83:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1004c/- | (cc=0.4312) | info on Rv1004c/- |
| Rv3729/- | (cc=0.4295) | info on Rv3729/- |
| Rv2974c/- | (cc=0.4258) | info on Rv2974c/- |
| Rv0393/- | (cc=0.4252) | info on Rv0393/- |
| Rv2016/- | (cc=0.4248) | info on Rv2016/- |
| Rv3758c/proV | (cc=0.4213) | info on Rv3758c/proV |
| Rv2312/- | (cc=0.4058) | info on Rv2312/- |
| Rv0409/ackA | (cc=0.3935) | info on Rv0409/ackA |
| Rv0492c/- | (cc=0.3785) | info on Rv0492c/- |
| Rv1468c/PE_PGRS29 | (cc=0.3778) | info on Rv1468c/PE_PGRS29 |
Correlation of Rv2873/mpt83 with Rv0409/ackA
Normalized LFCs for Rv2873/mpt83:
(description and provenance of datasets)
| Rv2873/mpt83 | Rv0409/ackA | |
| Fe_supp_jason_reseq | -0.467 | 0.868 |
| low_pH_jason_reseq | -0.892 | 0.136 |
| NO_jason_reseq | -0.021 | 0.315 |
| B6_jason_reseq | -0.028 | -0.581 |
| MHCII_jason_reseq | -0.9 | -0.541 |
| Isoniazid02 | 0.137 | 0.112 |
| Rifampicin4 | 0.024 | 0.0 |
| Ethambutol3 | 0.323 | 2.079 |
| Meropenem3 | 1.144 | 3.648 |
| Vancomycin16 | 0.138 | 0.395 |
| Rv2680_day32 | 0.296 | 0.362 |
| H37Rv_KO_MarP | 0.095 | 0.024 |
| hypoxia_3wks | -0.207 | 0.152 |
| hypoxia_6wks | 0.157 | -0.827 |
| glycerol | -0.149 | 0.028 |
| cholesterol | 0.86 | 0.43 |
| AJ | -0.055 | -0.919 |
| Bibs02 | 0.232 | 1.699 |
| Bibs02c | 0.065 | -0.411 |
| BL6 | -0.458 | 0.507 |
| BL6a | -0.453 | -0.199 |
| BXD01 | -0.476 | 0.053 |
| BXD010 | 0.03 | 0.589 |
| BXD011 | -0.073 | 0.704 |
| BXD03 | -0.762 | -0.157 |
| BXD04 | -0.569 | -0.541 |
| BXD05 | -0.555 | 0.909 |
| BXD06 | 0.042 | 0.156 |
| BXD07 | -0.743 | -0.391 |
| BXD08 | -0.345 | 0.514 |
| BXD09 | -0.699 | -0.502 |
| CAST | -0.27 | -0.736 |
| CCcont | -0.285 | 0.04 |
| DS01 | 0.412 | 0.821 |
| DS02 | 0.479 | 0.484 |
| DS04 | -0.298 | 0.343 |
| DS0c | 0.987 | 1.702 |
| GP01 | 0.659 | -0.496 |
| GP02 | -1.038 | -1.302 |
| GP0c | 0.927 | 0.152 |
| NOD | -0.091 | -1.178 |
| NZO | -0.477 | -0.6 |
| PWK | 0.193 | -0.082 |
| H37Rv_KO_CtpC | 0.883 | 0.149 |
| H37Rv_KO_CtpD | 0.845 | 1.112 |
| H37Rv_KO_Rv1272 | 0.284 | -0.253 |
| H37Rv_KO_SugABC | 0.565 | -1.071 |
| H37Rv_KO_MbtN | -0.139 | 0.446 |
| Trans05 | 0.156 | 0.319 |
| macrophage_unactivated | -0.966 | -0.486 |
| IL1 | -0.86 | 0.16 |
| Rapamycin | 0.04 | 0.218 |
| Tcell | -0.355 | -0.437 |
| GMCSF | 0.0 | -1.048 |
| IFNab | -1.557 | -0.59 |
| IFNg | -0.329 | -0.305 |
| IFNg_GMCSF1 | -0.167 | -1.1 |
| Rv1432_day32 | 0.145 | -0.654 |
| Rv1565c_day32 | -1.518 | 0.389 |
| secA2_input | 0.549 | -0.205 |
| delta_Rv3594 | 0.445 | 0.0 |
| delta_Rv3717 | 0.148 | -0.047 |
| delta_Rv3811 | -0.428 | -0.354 |
| delta_Rv0954 | 1.56 | -0.121 |
| PonA1 | -0.017 | 0.611 |
| EccD1_KO | 0.395 | -0.276 |
| EspI_KO | -1.195 | -1.007 |
| PE35_KO | -0.493 | -0.461 |
| PPE68_KO | -0.621 | -0.045 |
| glycerol2 | 0.059 | 0.13 |
| lignocerate | 0.306 | -0.213 |
| oleate | -0.077 | -0.227 |
| phosphatidylcholine | 0.087 | 0.202 |
| acetate | 0.052 | -0.451 |
| glucAc | -0.314 | -0.693 |
| Rv0950ko | 0.232 | -0.13 |
| Rv1096ko | 0.066 | 0.368 |
| Rv3684ko | -0.187 | -0.141 |
| delta_otsA_trehalose | -1.475 | -0.965 |