Top 10 genes with highest correlation to Rv2873/mpt83:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1004c/- | (cc=0.4312) | info on Rv1004c/- |
| Rv3729/- | (cc=0.4295) | info on Rv3729/- |
| Rv2974c/- | (cc=0.4258) | info on Rv2974c/- |
| Rv0393/- | (cc=0.4252) | info on Rv0393/- |
| Rv2016/- | (cc=0.4248) | info on Rv2016/- |
| Rv3758c/proV | (cc=0.4213) | info on Rv3758c/proV |
| Rv2312/- | (cc=0.4058) | info on Rv2312/- |
| Rv0409/ackA | (cc=0.3935) | info on Rv0409/ackA |
| Rv0492c/- | (cc=0.3785) | info on Rv0492c/- |
| Rv1468c/PE_PGRS29 | (cc=0.3778) | info on Rv1468c/PE_PGRS29 |
Correlation of Rv2873/mpt83 with Rv1004c/-
Normalized LFCs for Rv2873/mpt83:
(description and provenance of datasets)
| Rv2873/mpt83 | Rv1004c/- | |
| Fe_supp_jason_reseq | -0.467 | -0.445 |
| low_pH_jason_reseq | -0.892 | -0.674 |
| NO_jason_reseq | -0.021 | 0.039 |
| B6_jason_reseq | -0.028 | -0.394 |
| MHCII_jason_reseq | -0.9 | 0.324 |
| Isoniazid02 | 0.137 | -0.093 |
| Rifampicin4 | 0.024 | 0.165 |
| Ethambutol3 | 0.323 | 1.51 |
| Meropenem3 | 1.144 | 0.527 |
| Vancomycin16 | 0.138 | 0.379 |
| Rv2680_day32 | 0.296 | 0.138 |
| H37Rv_KO_MarP | 0.095 | 0.33 |
| hypoxia_3wks | -0.207 | 0.279 |
| hypoxia_6wks | 0.157 | -0.39 |
| glycerol | -0.149 | 0.714 |
| cholesterol | 0.86 | 0.292 |
| AJ | -0.055 | 0.81 |
| Bibs02 | 0.232 | 0.138 |
| Bibs02c | 0.065 | 0.493 |
| BL6 | -0.458 | -1.506 |
| BL6a | -0.453 | -0.036 |
| BXD01 | -0.476 | -0.184 |
| BXD010 | 0.03 | -0.421 |
| BXD011 | -0.073 | -0.985 |
| BXD03 | -0.762 | -0.423 |
| BXD04 | -0.569 | 0.212 |
| BXD05 | -0.555 | -0.41 |
| BXD06 | 0.042 | -0.718 |
| BXD07 | -0.743 | -0.274 |
| BXD08 | -0.345 | 0.151 |
| BXD09 | -0.699 | -1.141 |
| CAST | -0.27 | -0.232 |
| CCcont | -0.285 | -1.537 |
| DS01 | 0.412 | 0.429 |
| DS02 | 0.479 | 0.35 |
| DS04 | -0.298 | 1.043 |
| DS0c | 0.987 | -0.162 |
| GP01 | 0.659 | 0.82 |
| GP02 | -1.038 | 0.257 |
| GP0c | 0.927 | 0.349 |
| NOD | -0.091 | 0.013 |
| NZO | -0.477 | -0.863 |
| PWK | 0.193 | -0.402 |
| H37Rv_KO_CtpC | 0.883 | 0.048 |
| H37Rv_KO_CtpD | 0.845 | 0.852 |
| H37Rv_KO_Rv1272 | 0.284 | 0.042 |
| H37Rv_KO_SugABC | 0.565 | -0.087 |
| H37Rv_KO_MbtN | -0.139 | -0.348 |
| Trans05 | 0.156 | 0.422 |
| macrophage_unactivated | -0.966 | -1.032 |
| IL1 | -0.86 | -0.584 |
| Rapamycin | 0.04 | -1.132 |
| Tcell | -0.355 | -0.935 |
| GMCSF | 0.0 | -1.048 |
| IFNab | -1.557 | -1.56 |
| IFNg | -0.329 | -1.636 |
| IFNg_GMCSF1 | -0.167 | -1.477 |
| Rv1432_day32 | 0.145 | 0.799 |
| Rv1565c_day32 | -1.518 | -0.725 |
| secA2_input | 0.549 | -0.584 |
| delta_Rv3594 | 0.445 | -0.119 |
| delta_Rv3717 | 0.148 | 0.165 |
| delta_Rv3811 | -0.428 | 0.235 |
| delta_Rv0954 | 1.56 | 0.019 |
| PonA1 | -0.017 | -0.166 |
| EccD1_KO | 0.395 | -0.125 |
| EspI_KO | -1.195 | -0.054 |
| PE35_KO | -0.493 | -1.205 |
| PPE68_KO | -0.621 | -1.376 |
| glycerol2 | 0.059 | -0.448 |
| lignocerate | 0.306 | -0.492 |
| oleate | -0.077 | 0.539 |
| phosphatidylcholine | 0.087 | 0.09 |
| acetate | 0.052 | -0.637 |
| glucAc | -0.314 | -0.92 |
| Rv0950ko | 0.232 | -0.121 |
| Rv1096ko | 0.066 | -0.072 |
| Rv3684ko | -0.187 | -0.897 |
| delta_otsA_trehalose | -1.475 | -0.838 |