Top 10 genes with highest correlation to Rv2872/vapC43:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1323/fadA4 | (cc=0.6925) | info on Rv1323/fadA4 |
| Rv0379/secE2 | (cc=0.6353) | info on Rv0379/secE2 |
| Rv1834/lipZ | (cc=0.6328) | info on Rv1834/lipZ |
| Rv3354/- | (cc=0.6136) | info on Rv3354/- |
| Rv3506/fadD17 | (cc=0.6103) | info on Rv3506/fadD17 |
| Rv1999c/- | (cc=0.5921) | info on Rv1999c/- |
| Rv3196/- | (cc=0.5857) | info on Rv3196/- |
| Rv0447c/ufaA1 | (cc=0.5796) | info on Rv0447c/ufaA1 |
| Rv2599/- | (cc=0.5671) | info on Rv2599/- |
| Rv3037c/- | (cc=0.5667) | info on Rv3037c/- |
Correlation of Rv2872/vapC43 with Rv0447c/ufaA1
Normalized LFCs for Rv2872/vapC43:
(description and provenance of datasets)
| Rv2872/vapC43 | Rv0447c/ufaA1 | |
| Fe_supp_jason_reseq | -0.658 | -0.09 |
| low_pH_jason_reseq | -1.364 | -0.622 |
| NO_jason_reseq | -0.837 | 0.0 |
| B6_jason_reseq | -0.762 | 0.083 |
| MHCII_jason_reseq | 0.13 | 0.768 |
| Isoniazid02 | -0.144 | -0.291 |
| Rifampicin4 | 0.084 | -0.089 |
| Ethambutol3 | 0.76 | 0.964 |
| Meropenem3 | 0.03 | 0.211 |
| Vancomycin16 | 0.212 | 0.0 |
| Rv2680_day32 | -0.647 | 0.409 |
| H37Rv_KO_MarP | 0.514 | -0.104 |
| hypoxia_3wks | -0.203 | -0.179 |
| hypoxia_6wks | 0.393 | -0.19 |
| glycerol | -1.207 | -0.161 |
| cholesterol | -0.346 | -0.147 |
| AJ | -0.166 | -0.439 |
| Bibs02 | -0.131 | 0.012 |
| Bibs02c | 0.126 | -0.182 |
| BL6 | -0.108 | -0.623 |
| BL6a | -0.809 | -0.455 |
| BXD01 | -1.443 | -0.86 |
| BXD010 | -2.081 | -0.354 |
| BXD011 | -0.963 | -0.523 |
| BXD03 | -1.445 | -1.102 |
| BXD04 | -1.754 | 0.169 |
| BXD05 | -1.707 | -0.475 |
| BXD06 | -1.292 | -0.73 |
| BXD07 | -1.149 | -0.425 |
| BXD08 | -1.94 | -0.345 |
| BXD09 | -1.41 | 0.113 |
| CAST | -0.234 | 0.038 |
| CCcont | -1.087 | -0.843 |
| DS01 | -0.142 | 0.181 |
| DS02 | 0.008 | 0.323 |
| DS04 | -1.453 | 0.26 |
| DS0c | -0.261 | 0.014 |
| GP01 | -0.672 | -0.406 |
| GP02 | -0.6 | -0.157 |
| GP0c | -1.317 | -0.842 |
| NOD | 1.611 | 1.05 |
| NZO | -0.705 | -0.238 |
| PWK | -0.722 | 0.09 |
| H37Rv_KO_CtpC | -1.032 | -0.499 |
| H37Rv_KO_CtpD | -0.109 | -0.128 |
| H37Rv_KO_Rv1272 | -0.143 | -0.36 |
| H37Rv_KO_SugABC | -0.472 | -0.22 |
| H37Rv_KO_MbtN | -0.722 | -0.855 |
| Trans05 | -0.023 | -0.191 |
| macrophage_unactivated | -1.121 | -0.114 |
| IL1 | -0.774 | -0.125 |
| Rapamycin | -0.531 | 0.331 |
| Tcell | -0.766 | -0.684 |
| GMCSF | -0.586 | -0.243 |
| IFNab | -0.868 | -0.109 |
| IFNg | -0.27 | -0.128 |
| IFNg_GMCSF1 | 0.635 | 0.236 |
| Rv1432_day32 | 0.528 | 0.94 |
| Rv1565c_day32 | 0.355 | -0.216 |
| secA2_input | 0.559 | 0.243 |
| delta_Rv3594 | -0.69 | -0.369 |
| delta_Rv3717 | -0.267 | -0.332 |
| delta_Rv3811 | -0.928 | -0.079 |
| delta_Rv0954 | -0.074 | 0.025 |
| PonA1 | -0.092 | 0.158 |
| EccD1_KO | 1.121 | 0.533 |
| EspI_KO | 0.048 | 0.659 |
| PE35_KO | 1.015 | -0.298 |
| PPE68_KO | 0.403 | 0.106 |
| glycerol2 | 0.195 | -0.092 |
| lignocerate | 0.452 | -0.08 |
| oleate | -0.021 | 0.319 |
| phosphatidylcholine | 0.389 | -0.113 |
| acetate | 0.318 | -0.012 |
| glucAc | 1.198 | -0.436 |
| Rv0950ko | 0.582 | 0.742 |
| Rv1096ko | 1.613 | 0.992 |
| Rv3684ko | 1.261 | 0.897 |
| delta_otsA_trehalose | -0.62 | 0.461 |