Top 10 genes with highest correlation to Rv2854/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1075c/- | (cc=0.5395) | info on Rv1075c/- |
| Rv0837c/- | (cc=0.5222) | info on Rv0837c/- |
| Rv1976c/- | (cc=0.4611) | info on Rv1976c/- |
| Rv0982/mprB | (cc=0.451) | info on Rv0982/mprB |
| Rv2042c/- | (cc=0.4489) | info on Rv2042c/- |
| Rv2180c/- | (cc=0.4462) | info on Rv2180c/- |
| Rv1638A/- | (cc=0.4454) | info on Rv1638A/- |
| Rv3392c/cmaA1 | (cc=0.4349) | info on Rv3392c/cmaA1 |
| Rv1149/- | (cc=0.4282) | info on Rv1149/- |
| Rv0461/- | (cc=0.4258) | info on Rv0461/- |
Correlation of Rv2854/- with Rv0982/mprB
Normalized LFCs for Rv2854/-:
(description and provenance of datasets)
| Rv2854/- | Rv0982/mprB | |
| Fe_supp_jason_reseq | -0.189 | -0.431 |
| low_pH_jason_reseq | -0.485 | -0.358 |
| NO_jason_reseq | -0.457 | -0.134 |
| B6_jason_reseq | -0.093 | -0.517 |
| MHCII_jason_reseq | 0.78 | 0.182 |
| Isoniazid02 | -0.627 | 0.0 |
| Rifampicin4 | 0.547 | 0.222 |
| Ethambutol3 | 0.963 | 0.53 |
| Meropenem3 | -1.072 | -0.217 |
| Vancomycin16 | 0.082 | 0.0 |
| Rv2680_day32 | -0.161 | -0.195 |
| H37Rv_KO_MarP | -0.443 | -0.871 |
| hypoxia_3wks | 0.447 | 0.0 |
| hypoxia_6wks | -0.123 | 0.616 |
| glycerol | -0.455 | -0.446 |
| cholesterol | -0.48 | -0.614 |
| AJ | 0.163 | -0.513 |
| Bibs02 | -0.449 | 0.0 |
| Bibs02c | -0.196 | 1.463 |
| BL6 | 0.248 | 1.081 |
| BL6a | 0.0 | 0.997 |
| BXD01 | -0.168 | -0.066 |
| BXD010 | 0.119 | 1.382 |
| BXD011 | -0.494 | 0.641 |
| BXD03 | -0.238 | -0.475 |
| BXD04 | 0.326 | 1.013 |
| BXD05 | 0.545 | 0.0 |
| BXD06 | -0.21 | -0.295 |
| BXD07 | 0.097 | -0.486 |
| BXD08 | 0.053 | 0.186 |
| BXD09 | -0.094 | -0.071 |
| CAST | -0.976 | -0.509 |
| CCcont | -0.561 | 0.142 |
| DS01 | 0.094 | 0.431 |
| DS02 | -0.09 | -0.35 |
| DS04 | 0.136 | -0.429 |
| DS0c | -0.222 | -0.919 |
| GP01 | -1.208 | 0.048 |
| GP02 | -1.538 | -0.353 |
| GP0c | -0.616 | 0.237 |
| NOD | -0.483 | -0.789 |
| NZO | -0.204 | -1.166 |
| PWK | -0.831 | 0.516 |
| H37Rv_KO_CtpC | 0.621 | 1.294 |
| H37Rv_KO_CtpD | -0.507 | -0.856 |
| H37Rv_KO_Rv1272 | -0.598 | -0.4 |
| H37Rv_KO_SugABC | -0.742 | -0.42 |
| H37Rv_KO_MbtN | -0.296 | 0.188 |
| Trans05 | -0.417 | -0.655 |
| macrophage_unactivated | 0.732 | -0.246 |
| IL1 | -0.282 | -0.736 |
| Rapamycin | 0.239 | -1.353 |
| Tcell | 0.075 | 0.241 |
| GMCSF | -0.349 | -0.206 |
| IFNab | -0.142 | -0.484 |
| IFNg | 0.62 | -0.911 |
| IFNg_GMCSF1 | 0.412 | 0.452 |
| Rv1432_day32 | -0.196 | -0.583 |
| Rv1565c_day32 | 0.859 | 0.0 |
| secA2_input | 0.402 | -0.578 |
| delta_Rv3594 | 0.052 | 1.337 |
| delta_Rv3717 | 0.793 | 0.736 |
| delta_Rv3811 | 1.034 | 1.658 |
| delta_Rv0954 | 1.358 | 2.244 |
| PonA1 | 1.193 | 0.675 |
| EccD1_KO | 0.329 | -1.49 |
| EspI_KO | -0.148 | -0.328 |
| PE35_KO | -0.312 | -0.516 |
| PPE68_KO | 0.054 | -0.368 |
| glycerol2 | -0.652 | 0.0 |
| lignocerate | -0.783 | 0.11 |
| oleate | 0.011 | 0.362 |
| phosphatidylcholine | -0.588 | 0.464 |
| acetate | -0.716 | -0.16 |
| glucAc | -1.548 | -0.263 |
| Rv0950ko | 0.678 | 0.416 |
| Rv1096ko | 0.679 | 1.143 |
| Rv3684ko | 0.383 | 0.0 |
| delta_otsA_trehalose | -2.484 | -1.846 |