Top 10 genes with highest correlation to Rv2848c/cobB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1817/- | (cc=0.7965) | info on Rv1817/- |
| Rv2113/- | (cc=0.7197) | info on Rv2113/- |
| Rv0453/PPE11 | (cc=0.7152) | info on Rv0453/PPE11 |
| Rv2822c/- | (cc=0.7105) | info on Rv2822c/- |
| Rv3815c/- | (cc=0.6271) | info on Rv3815c/- |
| Rv0159c/PE3 | (cc=0.6085) | info on Rv0159c/PE3 |
| Rv1480/- | (cc=0.5831) | info on Rv1480/- |
| Rv0441c/- | (cc=0.5352) | info on Rv0441c/- |
| Rv3091/- | (cc=0.4989) | info on Rv3091/- |
| Rv1412/ribC | (cc=0.4823) | info on Rv1412/ribC |
Correlation of Rv2848c/cobB with Rv1412/ribC
Normalized LFCs for Rv2848c/cobB:
(description and provenance of datasets)
| Rv2848c/cobB | Rv1412/ribC | |
| Fe_supp_jason_reseq | 0.66 | -0.766 |
| low_pH_jason_reseq | -0.212 | -0.179 |
| NO_jason_reseq | 0.071 | 0.263 |
| B6_jason_reseq | 0.274 | -0.538 |
| MHCII_jason_reseq | 0.558 | -0.474 |
| Isoniazid02 | 1.521 | 0.851 |
| Rifampicin4 | 0.72 | 0.601 |
| Ethambutol3 | 1.454 | 0.14 |
| Meropenem3 | 0.187 | 0.497 |
| Vancomycin16 | 0.706 | 1.101 |
| Rv2680_day32 | -0.633 | 0.0 |
| H37Rv_KO_MarP | -0.161 | 0.622 |
| hypoxia_3wks | 0.263 | -0.459 |
| hypoxia_6wks | -0.035 | 1.969 |
| glycerol | 0.426 | -0.301 |
| cholesterol | 0.385 | -0.338 |
| AJ | 0.521 | -0.346 |
| Bibs02 | 0.534 | -0.427 |
| Bibs02c | 0.303 | -0.677 |
| BL6 | 0.39 | -0.53 |
| BL6a | -0.034 | 0.489 |
| BXD01 | -0.805 | -0.194 |
| BXD010 | -1.385 | -0.415 |
| BXD011 | -0.787 | 1.05 |
| BXD03 | -0.372 | -0.573 |
| BXD04 | -0.708 | -0.4 |
| BXD05 | -0.832 | -0.57 |
| BXD06 | -0.705 | -0.432 |
| BXD07 | -1.089 | 0.093 |
| BXD08 | -0.251 | -0.31 |
| BXD09 | -1.055 | -0.596 |
| CAST | 0.02 | 0.923 |
| CCcont | -0.497 | 0.733 |
| DS01 | 0.58 | 0.946 |
| DS02 | 0.799 | -0.922 |
| DS04 | 0.748 | -0.822 |
| DS0c | 0.487 | 0.0 |
| GP01 | -0.741 | -0.418 |
| GP02 | -0.257 | -0.353 |
| GP0c | -0.167 | 0.088 |
| NOD | -0.334 | 0.428 |
| NZO | 0.212 | 0.38 |
| PWK | 0.342 | 0.786 |
| H37Rv_KO_CtpC | -0.324 | 0.309 |
| H37Rv_KO_CtpD | -0.067 | -0.537 |
| H37Rv_KO_Rv1272 | -0.372 | -0.598 |
| H37Rv_KO_SugABC | -1.675 | 0.443 |
| H37Rv_KO_MbtN | -1.399 | -0.437 |
| Trans05 | -0.419 | -0.554 |
| macrophage_unactivated | 2.071 | 3.592 |
| IL1 | 2.948 | 1.83 |
| Rapamycin | 2.627 | 0.285 |
| Tcell | -4.822 | -0.326 |
| GMCSF | 2.986 | 1.096 |
| IFNab | 3.223 | 3.304 |
| IFNg | 2.881 | 1.296 |
| IFNg_GMCSF1 | 4.342 | 1.071 |
| Rv1432_day32 | -0.257 | 0.0 |
| Rv1565c_day32 | 0.134 | 0.0 |
| secA2_input | 1.061 | -0.545 |
| delta_Rv3594 | -0.199 | -0.471 |
| delta_Rv3717 | -0.273 | -0.388 |
| delta_Rv3811 | -1.05 | -2.051 |
| delta_Rv0954 | -0.696 | -1.782 |
| PonA1 | 0.17 | -1.592 |
| EccD1_KO | -0.122 | 0.0 |
| EspI_KO | 0.103 | -1.383 |
| PE35_KO | 0.863 | -0.648 |
| PPE68_KO | 0.39 | 0.0 |
| glycerol2 | 0.475 | 0.0 |
| lignocerate | 0.66 | 0.0 |
| oleate | 0.2 | 0.0 |
| phosphatidylcholine | 0.675 | 0.0 |
| acetate | 1.714 | 0.973 |
| glucAc | 0.59 | 0.792 |
| Rv0950ko | -0.199 | -1.894 |
| Rv1096ko | 0.507 | -0.844 |
| Rv3684ko | -1.068 | -0.593 |
| delta_otsA_trehalose | 0.322 | 0.739 |