Top 10 genes with highest correlation to Rv2848c/cobB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1817/- | (cc=0.7965) | info on Rv1817/- |
| Rv2113/- | (cc=0.7197) | info on Rv2113/- |
| Rv0453/PPE11 | (cc=0.7152) | info on Rv0453/PPE11 |
| Rv2822c/- | (cc=0.7105) | info on Rv2822c/- |
| Rv3815c/- | (cc=0.6271) | info on Rv3815c/- |
| Rv0159c/PE3 | (cc=0.6085) | info on Rv0159c/PE3 |
| Rv1480/- | (cc=0.5831) | info on Rv1480/- |
| Rv0441c/- | (cc=0.5352) | info on Rv0441c/- |
| Rv3091/- | (cc=0.4989) | info on Rv3091/- |
| Rv1412/ribC | (cc=0.4823) | info on Rv1412/ribC |
Correlation of Rv2848c/cobB with Rv0453/PPE11
Normalized LFCs for Rv2848c/cobB:
(description and provenance of datasets)
| Rv2848c/cobB | Rv0453/PPE11 | |
| Fe_supp_jason_reseq | 0.66 | 0.316 |
| low_pH_jason_reseq | -0.212 | -1.062 |
| NO_jason_reseq | 0.071 | -0.339 |
| B6_jason_reseq | 0.274 | 0.514 |
| MHCII_jason_reseq | 0.558 | 0.068 |
| Isoniazid02 | 1.521 | 0.535 |
| Rifampicin4 | 0.72 | -0.119 |
| Ethambutol3 | 1.454 | 0.539 |
| Meropenem3 | 0.187 | 0.121 |
| Vancomycin16 | 0.706 | 0.0 |
| Rv2680_day32 | -0.633 | -0.072 |
| H37Rv_KO_MarP | -0.161 | 0.315 |
| hypoxia_3wks | 0.263 | 0.144 |
| hypoxia_6wks | -0.035 | -0.265 |
| glycerol | 0.426 | -0.607 |
| cholesterol | 0.385 | -0.039 |
| AJ | 0.521 | -0.116 |
| Bibs02 | 0.534 | 0.087 |
| Bibs02c | 0.303 | 0.294 |
| BL6 | 0.39 | -0.962 |
| BL6a | -0.034 | 0.136 |
| BXD01 | -0.805 | -0.407 |
| BXD010 | -1.385 | -0.788 |
| BXD011 | -0.787 | -0.361 |
| BXD03 | -0.372 | 0.029 |
| BXD04 | -0.708 | -0.016 |
| BXD05 | -0.832 | -0.628 |
| BXD06 | -0.705 | -0.604 |
| BXD07 | -1.089 | -0.527 |
| BXD08 | -0.251 | -0.251 |
| BXD09 | -1.055 | -0.473 |
| CAST | 0.02 | 0.342 |
| CCcont | -0.497 | -1.136 |
| DS01 | 0.58 | 0.313 |
| DS02 | 0.799 | 0.605 |
| DS04 | 0.748 | 0.474 |
| DS0c | 0.487 | 0.167 |
| GP01 | -0.741 | -0.338 |
| GP02 | -0.257 | -0.053 |
| GP0c | -0.167 | -0.953 |
| NOD | -0.334 | -0.185 |
| NZO | 0.212 | -0.314 |
| PWK | 0.342 | 0.222 |
| H37Rv_KO_CtpC | -0.324 | -0.518 |
| H37Rv_KO_CtpD | -0.067 | -0.069 |
| H37Rv_KO_Rv1272 | -0.372 | 0.359 |
| H37Rv_KO_SugABC | -1.675 | 0.188 |
| H37Rv_KO_MbtN | -1.399 | 0.237 |
| Trans05 | -0.419 | 0.372 |
| macrophage_unactivated | 2.071 | 0.338 |
| IL1 | 2.948 | 1.106 |
| Rapamycin | 2.627 | 1.28 |
| Tcell | -4.822 | -3.421 |
| GMCSF | 2.986 | 1.708 |
| IFNab | 3.223 | 0.716 |
| IFNg | 2.881 | 1.799 |
| IFNg_GMCSF1 | 4.342 | 1.31 |
| Rv1432_day32 | -0.257 | -0.185 |
| Rv1565c_day32 | 0.134 | -0.169 |
| secA2_input | 1.061 | -0.319 |
| delta_Rv3594 | -0.199 | -0.15 |
| delta_Rv3717 | -0.273 | -0.458 |
| delta_Rv3811 | -1.05 | -0.574 |
| delta_Rv0954 | -0.696 | -0.707 |
| PonA1 | 0.17 | -0.613 |
| EccD1_KO | -0.122 | -0.257 |
| EspI_KO | 0.103 | -0.722 |
| PE35_KO | 0.863 | -0.688 |
| PPE68_KO | 0.39 | -0.614 |
| glycerol2 | 0.475 | 0.363 |
| lignocerate | 0.66 | -0.062 |
| oleate | 0.2 | 0.635 |
| phosphatidylcholine | 0.675 | 0.38 |
| acetate | 1.714 | -0.527 |
| glucAc | 0.59 | -0.797 |
| Rv0950ko | -0.199 | 0.302 |
| Rv1096ko | 0.507 | -0.431 |
| Rv3684ko | -1.068 | 0.259 |
| delta_otsA_trehalose | 0.322 | -0.974 |