Top 10 genes with highest correlation to Rv2800/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2976c/ung | (cc=0.4519) | info on Rv2976c/ung |
| Rv0375c/- | (cc=0.4494) | info on Rv0375c/- |
| Rv2601/speE | (cc=0.4322) | info on Rv2601/speE |
| Rv3188/- | (cc=0.4268) | info on Rv3188/- |
| Rv0141c/- | (cc=0.4122) | info on Rv0141c/- |
| Rv3233c/- | (cc=0.3932) | info on Rv3233c/- |
| Rv2598/- | (cc=0.3917) | info on Rv2598/- |
| Rv0557/mgtA | (cc=0.3856) | info on Rv0557/mgtA |
| Rv3333c/- | (cc=0.3808) | info on Rv3333c/- |
| Rv1125/- | (cc=0.3772) | info on Rv1125/- |
Correlation of Rv2800/- with Rv0375c/-
Normalized LFCs for Rv2800/-:
(description and provenance of datasets)
| Rv2800/- | Rv0375c/- | |
| Fe_supp_jason_reseq | -0.167 | 0.428 |
| low_pH_jason_reseq | -0.545 | 0.238 |
| NO_jason_reseq | -0.236 | -0.717 |
| B6_jason_reseq | 0.485 | 2.377 |
| MHCII_jason_reseq | 0.614 | 1.581 |
| Isoniazid02 | 0.164 | 0.186 |
| Rifampicin4 | 0.55 | 0.59 |
| Ethambutol3 | -0.216 | 0.08 |
| Meropenem3 | 0.079 | 0.153 |
| Vancomycin16 | 0.3 | 0.257 |
| Rv2680_day32 | 0.092 | -1.97 |
| H37Rv_KO_MarP | 0.236 | 0.636 |
| hypoxia_3wks | 0.363 | 0.917 |
| hypoxia_6wks | -0.367 | -1.109 |
| glycerol | 0.424 | -0.671 |
| cholesterol | 0.064 | -0.12 |
| AJ | 0.136 | -0.929 |
| Bibs02 | -0.668 | -1.709 |
| Bibs02c | 0.062 | -0.564 |
| BL6 | 0.134 | -1.378 |
| BL6a | -0.108 | -0.453 |
| BXD01 | -0.223 | -0.552 |
| BXD010 | -0.253 | -1.984 |
| BXD011 | -0.465 | -1.05 |
| BXD03 | 0.464 | -0.896 |
| BXD04 | 0.717 | -1.42 |
| BXD05 | -0.041 | -1.063 |
| BXD06 | -0.182 | -0.925 |
| BXD07 | -0.097 | -0.689 |
| BXD08 | 0.279 | -1.406 |
| BXD09 | -0.179 | -1.11 |
| CAST | 0.017 | 0.34 |
| CCcont | -0.366 | -1.082 |
| DS01 | 1.076 | -0.115 |
| DS02 | 0.613 | -0.035 |
| DS04 | 0.758 | -0.126 |
| DS0c | 0.946 | -0.069 |
| GP01 | 0.606 | -0.226 |
| GP02 | -0.157 | -1.13 |
| GP0c | -0.211 | -0.35 |
| NOD | 2.379 | 3.03 |
| NZO | -0.172 | -1.15 |
| PWK | -0.185 | -0.449 |
| H37Rv_KO_CtpC | -0.321 | 0.026 |
| H37Rv_KO_CtpD | -0.462 | -0.567 |
| H37Rv_KO_Rv1272 | -0.169 | -1.022 |
| H37Rv_KO_SugABC | 0.977 | 1.391 |
| H37Rv_KO_MbtN | -0.754 | -1.75 |
| Trans05 | -0.212 | -0.201 |
| macrophage_unactivated | 2.108 | 1.97 |
| IL1 | -0.11 | 0.0 |
| Rapamycin | -0.141 | 0.353 |
| Tcell | -0.502 | 1.049 |
| GMCSF | -0.048 | -0.333 |
| IFNab | 0.242 | 1.116 |
| IFNg | -0.636 | -0.901 |
| IFNg_GMCSF1 | 0.085 | 1.442 |
| Rv1432_day32 | 0.19 | -0.18 |
| Rv1565c_day32 | -0.071 | -0.864 |
| secA2_input | -1.115 | 1.368 |
| delta_Rv3594 | -0.35 | -3.977 |
| delta_Rv3717 | 0.015 | -1.354 |
| delta_Rv3811 | -0.193 | -0.639 |
| delta_Rv0954 | 0.11 | -1.273 |
| PonA1 | 0.337 | -0.8 |
| EccD1_KO | 0.628 | 0.852 |
| EspI_KO | 0.302 | 0.448 |
| PE35_KO | 0.595 | -0.286 |
| PPE68_KO | 0.739 | -0.314 |
| glycerol2 | -0.436 | 0.0 |
| lignocerate | -0.483 | -0.413 |
| oleate | -0.098 | 0.522 |
| phosphatidylcholine | -0.197 | 0.157 |
| acetate | -0.057 | -0.768 |
| glucAc | -0.52 | -0.478 |
| Rv0950ko | -0.485 | 0.555 |
| Rv1096ko | 0.323 | 0.971 |
| Rv3684ko | -0.046 | 0.878 |
| delta_otsA_trehalose | -0.343 | -0.564 |