Top 10 genes with highest correlation to Rv2796c/lppV:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2331A/- | (cc=0.5178) | info on Rv2331A/- |
| Rv2328/PE23 | (cc=0.51) | info on Rv2328/PE23 |
| Rv3445c/esxU | (cc=0.5096) | info on Rv3445c/esxU |
| Rv2528c/mrr | (cc=0.4615) | info on Rv2528c/mrr |
| Rv0523c/- | (cc=0.461) | info on Rv0523c/- |
| Rv2919c/glnB | (cc=0.426) | info on Rv2919c/glnB |
| Rv1190/- | (cc=0.4189) | info on Rv1190/- |
| Rv0034/- | (cc=0.4158) | info on Rv0034/- |
| Rv1125/- | (cc=0.4109) | info on Rv1125/- |
| Rv0617/vapC29 | (cc=0.4092) | info on Rv0617/vapC29 |
Correlation of Rv2796c/lppV with Rv3445c/esxU
Normalized LFCs for Rv2796c/lppV:
(description and provenance of datasets)
| Rv2796c/lppV | Rv3445c/esxU | |
| Fe_supp_jason_reseq | -0.028 | -0.854 |
| low_pH_jason_reseq | -0.448 | -0.778 |
| NO_jason_reseq | 0.669 | 0.011 |
| B6_jason_reseq | 0.761 | 1.196 |
| MHCII_jason_reseq | -0.046 | 1.337 |
| Isoniazid02 | -0.247 | 0.106 |
| Rifampicin4 | -0.512 | -0.208 |
| Ethambutol3 | 0.119 | 0.054 |
| Meropenem3 | -0.01 | 1.584 |
| Vancomycin16 | 0.111 | -0.061 |
| Rv2680_day32 | 0.582 | -0.72 |
| H37Rv_KO_MarP | 0.869 | -0.801 |
| hypoxia_3wks | -0.136 | -0.379 |
| hypoxia_6wks | 0.357 | -0.205 |
| glycerol | -0.124 | -1.697 |
| cholesterol | -0.275 | -0.468 |
| AJ | 0.543 | -0.069 |
| Bibs02 | 0.505 | 0.633 |
| Bibs02c | 0.781 | 0.33 |
| BL6 | 0.33 | -1.139 |
| BL6a | 0.547 | -0.598 |
| BXD01 | 0.213 | -0.715 |
| BXD010 | 0.431 | -1.243 |
| BXD011 | -0.091 | -0.593 |
| BXD03 | 0.357 | -0.593 |
| BXD04 | 0.499 | -0.114 |
| BXD05 | 0.066 | -1.909 |
| BXD06 | 0.186 | -1.022 |
| BXD07 | 0.117 | -1.357 |
| BXD08 | -0.127 | -0.366 |
| BXD09 | 0.057 | -1.355 |
| CAST | 0.269 | -0.158 |
| CCcont | 0.055 | -1.298 |
| DS01 | 0.876 | 0.956 |
| DS02 | 0.868 | 1.1 |
| DS04 | 0.877 | 0.305 |
| DS0c | 1.067 | 0.544 |
| GP01 | 0.185 | 0.275 |
| GP02 | -1.339 | 0.421 |
| GP0c | -0.004 | 0.528 |
| NOD | 0.158 | -0.83 |
| NZO | -0.013 | -0.335 |
| PWK | 0.294 | -0.033 |
| H37Rv_KO_CtpC | -0.574 | -0.86 |
| H37Rv_KO_CtpD | -2.056 | -3.872 |
| H37Rv_KO_Rv1272 | -0.736 | -3.257 |
| H37Rv_KO_SugABC | -1.26 | -1.838 |
| H37Rv_KO_MbtN | -0.904 | -0.933 |
| Trans05 | 0.235 | -1.718 |
| macrophage_unactivated | -0.24 | 0.379 |
| IL1 | 0.05 | -0.214 |
| Rapamycin | -0.792 | -0.301 |
| Tcell | -0.072 | 0.254 |
| GMCSF | 1.077 | 0.528 |
| IFNab | -0.973 | -0.2 |
| IFNg | -0.537 | -1.053 |
| IFNg_GMCSF1 | 3.337 | 1.109 |
| Rv1432_day32 | 0.669 | 0.567 |
| Rv1565c_day32 | -0.303 | 0.232 |
| secA2_input | 0.632 | 2.519 |
| delta_Rv3594 | 0.794 | 0.0 |
| delta_Rv3717 | -0.581 | -0.189 |
| delta_Rv3811 | 0.409 | -0.335 |
| delta_Rv0954 | 0.081 | 0.758 |
| PonA1 | 1.489 | 0.427 |
| EccD1_KO | 0.181 | 0.47 |
| EspI_KO | 0.992 | 0.747 |
| PE35_KO | 0.68 | 1.158 |
| PPE68_KO | -0.352 | -0.022 |
| glycerol2 | 0.413 | 0.867 |
| lignocerate | 0.918 | 0.96 |
| oleate | -0.06 | 0.988 |
| phosphatidylcholine | 0.34 | 0.81 |
| acetate | 0.716 | 1.335 |
| glucAc | 0.846 | 0.023 |
| Rv0950ko | 0.332 | 1.375 |
| Rv1096ko | 0.199 | 2.576 |
| Rv3684ko | 0.56 | 1.772 |
| delta_otsA_trehalose | -1.466 | -1.792 |