Top 10 genes with highest correlation to Rv2782c/pepR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2684/arsA | (cc=0.5982) | info on Rv2684/arsA |
| Rv2335/cysE | (cc=0.5932) | info on Rv2335/cysE |
| Rv2901c/- | (cc=0.534) | info on Rv2901c/- |
| Rv2683/- | (cc=0.5318) | info on Rv2683/- |
| Rv0554/bpoC | (cc=0.4911) | info on Rv0554/bpoC |
| Rv1286/cysN | (cc=0.4794) | info on Rv1286/cysN |
| Rv2334/cysK1 | (cc=0.4745) | info on Rv2334/cysK1 |
| Rv1100/- | (cc=0.4662) | info on Rv1100/- |
| Rv2795c/- | (cc=0.4492) | info on Rv2795c/- |
| Rv2581c/- | (cc=0.4484) | info on Rv2581c/- |
Correlation of Rv2782c/pepR with Rv2335/cysE
Normalized LFCs for Rv2782c/pepR:
(description and provenance of datasets)
| Rv2782c/pepR | Rv2335/cysE | |
| Fe_supp_jason_reseq | 1.5 | 3.268 |
| low_pH_jason_reseq | 0.39 | 3.885 |
| NO_jason_reseq | -0.549 | -1.935 |
| B6_jason_reseq | 0.514 | 1.467 |
| MHCII_jason_reseq | 0.337 | -0.842 |
| Isoniazid02 | 0.348 | 2.714 |
| Rifampicin4 | 1.584 | 0.523 |
| Ethambutol3 | -0.035 | 1.018 |
| Meropenem3 | 2.27 | 0.0 |
| Vancomycin16 | 0.883 | 1.73 |
| Rv2680_day32 | 0.997 | 0.0 |
| H37Rv_KO_MarP | -1.089 | 1.274 |
| hypoxia_3wks | -2.408 | -1.36 |
| hypoxia_6wks | -1.693 | -0.518 |
| glycerol | -0.546 | 0.0 |
| cholesterol | -0.972 | 2.618 |
| AJ | -0.442 | 1.324 |
| Bibs02 | -0.629 | -0.183 |
| Bibs02c | 0.671 | -0.209 |
| BL6 | 0.865 | 1.125 |
| BL6a | 0.304 | 1.527 |
| BXD01 | 0.364 | 2.557 |
| BXD010 | 0.454 | 1.915 |
| BXD011 | -0.161 | 1.615 |
| BXD03 | 0.722 | 1.675 |
| BXD04 | -0.07 | 2.008 |
| BXD05 | 0.503 | 1.154 |
| BXD06 | 0.316 | 2.457 |
| BXD07 | 0.49 | 1.675 |
| BXD08 | 0.128 | 1.394 |
| BXD09 | 0.248 | 1.146 |
| CAST | 0.062 | 4.201 |
| CCcont | 0.428 | 1.565 |
| DS01 | 0.147 | 0.216 |
| DS02 | 0.854 | 0.704 |
| DS04 | -0.594 | 0.0 |
| DS0c | -1.455 | -0.217 |
| GP01 | -1.525 | -0.099 |
| GP02 | -0.544 | -0.083 |
| GP0c | -1.493 | -0.13 |
| NOD | -0.332 | 1.282 |
| NZO | 0.053 | 1.537 |
| PWK | 0.205 | 2.646 |
| H37Rv_KO_CtpC | -0.172 | 0.148 |
| H37Rv_KO_CtpD | 0.648 | 0.723 |
| H37Rv_KO_Rv1272 | -0.805 | 1.574 |
| H37Rv_KO_SugABC | -0.505 | -0.099 |
| H37Rv_KO_MbtN | -1.475 | 0.404 |
| Trans05 | -0.81 | 0.947 |
| macrophage_unactivated | -0.966 | -1.196 |
| IL1 | 0.128 | -1.124 |
| Rapamycin | -0.39 | 0.328 |
| Tcell | 0.072 | -0.785 |
| GMCSF | -1.146 | -1.001 |
| IFNab | -2.373 | -0.348 |
| IFNg | -1.622 | -1.013 |
| IFNg_GMCSF1 | -1.804 | -0.361 |
| Rv1432_day32 | -0.15 | 0.611 |
| Rv1565c_day32 | -0.425 | 2.631 |
| secA2_input | -1.34 | -1.296 |
| delta_Rv3594 | -1.869 | -2.348 |
| delta_Rv3717 | -3.01 | -3.335 |
| delta_Rv3811 | -2.162 | -3.324 |
| delta_Rv0954 | -0.376 | -0.667 |
| PonA1 | 0.279 | 0.537 |
| EccD1_KO | 0.056 | 1.694 |
| EspI_KO | -0.87 | 0.419 |
| PE35_KO | 1.135 | 2.269 |
| PPE68_KO | 0.368 | 2.188 |
| glycerol2 | -0.566 | -1.822 |
| lignocerate | -1.579 | -1.877 |
| oleate | -3.088 | -2.185 |
| phosphatidylcholine | -0.695 | -2.35 |
| acetate | 0.081 | 0.708 |
| glucAc | 0.18 | -0.199 |
| Rv0950ko | -0.757 | 1.143 |
| Rv1096ko | -0.437 | 1.541 |
| Rv3684ko | 0.478 | 2.577 |
| delta_otsA_trehalose | 0.179 | 0.468 |